Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1811 ATGAATTTTGAGGGTGAGCTCATGAATCTGAAGGACACGGAGCTGAGGTTAGGGTTGCCCGGAAGAGGTGAGGAACAAGATAAACGTTCATGCGGCGTCGTCAGGAGCAACAAGAGGTGTCGGCATGAGTCAAGTGAGGAGGAGGGGTCATCGGTAACCCAGAAGAACAACGCCGGTGACGGTTCTGATGACCAAGACAACGTGCCACCACCAGCAAAGGCACAAGTAGTGGGATGGCCACCCATTCGATCTTACAGGAAGAATTGTGTTCAACAACAAAACAGTGAGGGATGTCAAGAGCGTAGTGATGGGGCTGGATATGTGAAAGTCAGCATGGATGGTGCTCCTTATCTCAGGAAGATACATCTCAGAGTTTATAACAGCTATCCACAGCTCCTCAAGGCCTTGCAGAACATGTTCAAGTGCACTTTTGGTGAATACTCGGAAAGGGAGGGATACGATGGATCTGAATATGCTCCTACCTACCAAGACAAAGATGGCGACTGGATGCTGGTTGGAGATGTTCCATGGAATATGTTCATGTCATCTTGCAAGAGGCTGAGAATCATGAAAGGATCTGACGCTAAAGGATTGGGTGGTTCTTTATGA 609 0.4828 MNFEGELMNLKDTELRLGLPGRGEEQDKRSCGVVRSNKRCRHESSEEEGSSVTQKNNAGDGSDDQDNVPPPAKAQVVGWPPIRSYRKNCVQQQNSEGCQERSDGAGYVKVSMDGAPYLRKIHLRVYNSYPQLLKALQNMFKCTFGEYSEREGYDGSEYAPTYQDKDGDWMLVGDVPWNMFMSSCKRLRIMKGSDAKGLGGSL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1811 202 FunFam Auxin-responsive protein 100 202 - -
Acco02g1811 202 MobiDBLite consensus disorder prediction 18 77 - -
Acco02g1811 202 Gene3D - 100 201 - -
Acco02g1811 202 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 9 196 IPR003311 GO:0005634|GO:0006355
Acco02g1811 202 SUPERFAMILY CAD & PB1 domains 100 191 - -
Acco02g1811 202 ProSiteProfiles PB1 domain profile. 105 192 IPR000270 GO:0005515
Acco02g1811 202 Pfam AUX/IAA family 13 199 IPR033389 -
Acco02g1811 202 MobiDBLite consensus disorder prediction 18 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1811 Acco-ChrAcco02 14219477 14220410 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1811 99 198 B3 DNA Binding Superfamily AT2G46530 33.000 1.63e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Acco02g1811 AUX_IAA 1.1e-58 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1811 02 14219477 14220410 Acco02g1811 02 14219477 14220410 ECH