Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1809 ATGGGGTTTCCATATTCACATCTTGCACAGAACAAGCACAAGGAGATAACATCAGCTTGTCGTCACCTATCCCAGCAAGCTGGGAAAGTCCAGCTCACGCATTGAGAGAGAGAAGGCGGTGAATGGTTAGAGAGAGAAAGTGAATTATTATTGTTATTGATGGAAATGATAGGTGTGAAGAAGGAGAGGATGGGTTTCGAGGAAACAGAACTGAGGCTGGGATTGCCGGGAAATAATGGCGGCGCCAACGAATCGGAAGTGGCTAGAAAGAGAGGTTTCTCTGAGACTGAATCAGAGACTACTGTCGACTTGATGTTGAATCTCTCTTCTTCAAAGGAATCTGCAGATCCAACTGATACCCTCAAGAAGGAGGAGATCCTTCTGCCCTCTGATCCTGCCAAGCCTCCCGCCAAGGCGCAAGTAGTGGGTTGGCCACCAGTGAGATCGTTCAGAAAGAACATATTGAAGAACAATAATGGAGAAGAGAAGGAGAAAGGAAGCCCTAATAATAATGGAAGCTTCGTGAAAGTAAGCATGGATGGAGCTCCTTACCTTCGCAAAGTGGACCTCAAGTTGTACAACACTTACCAAGATCTCTATGATGCTCTTGCCAAAATGTTCAGCTCCTTCACCATTGGTAACTGTGGATCCCAAGGAATGAAGGACTTTATGAATGAGAGTAAGCTGATGAATCTCTTGAACAGCTCCGACTATGTCCCAACCTATGAAGACAAGGACGGCGACTGGATGCTTGTCGGCGACGTCCCTTGGGAGATGTTTGTTGAATCATGCAAGCGTTTGCGTATCATGAAAGGCAAGGAGGCTATCGGACTTGCACCGAGGGCCATGGAGAAGTGCAAGAACAGAAGCTAG 873 0.4685 MGFPYSHLAQNKHKEITSACRHLSQQAGKVQLTHXEREGGEWLERESELLLLLMEMIGVKKERMGFEETELRLGLPGNNGGANESEVARKRGFSETESETTVDLMLNLSSSKESADPTDTLKKEEILLPSDPAKPPAKAQVVGWPPVRSFRKNILKNNNGEEKEKGSPNNNGSFVKVSMDGAPYLRKVDLKLYNTYQDLYDALAKMFSSFTIGNCGSQGMKDFMNESKLMNLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1809 290 ProSiteProfiles PB1 domain profile. 172 272 IPR000270 GO:0005515
Acco02g1809 290 MobiDBLite consensus disorder prediction 77 98 - -
Acco02g1809 290 Gene3D - 167 283 - -
Acco02g1809 290 FunFam Auxin-responsive protein 167 282 - -
Acco02g1809 290 SUPERFAMILY CAD & PB1 domains 165 271 - -
Acco02g1809 290 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 65 277 IPR003311 GO:0005634|GO:0006355
Acco02g1809 290 Pfam AUX/IAA family 68 281 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1809 Acco-ChrAcco02 14208473 14210840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1809 157 275 B3 DNA Binding Superfamily AT2G46530 30.000 1.05e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Acco02g1809 AUX_IAA 6.6e-82 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1809 02 14208473 14210840 Acco02g1809 02 14208473 14210840 ECH