Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1796 ATGGCCGTCGACGCCCTTCAACTTCCTCGCGATTCTCTCCCCGATCCTCCCCCTCTCCCGCCTATGTCCCACCGTTTTGCCGCTCCCGCCTCTAGCTCTAAGGACGCGCATTTTAGAGGCGTCCGTAAGCGTCCCTGGGGCCGATTCGCCGCCGAGATCCGCAATCCCTGGAAGAAGACGCGCAAATGGCTTGGCACCTTTGATACCGCTGAGGAGGCGGCTCGGGCCTACGATGACGCTGCTAGGACTCTTCGTGGACCCAGGGCTAAGACTAACTTCGTTTATGCCCCTGTTTCCGTCGCTCCTTTGGTTCCGATGTCGCCGCCCAACTCCTCTTTTTCTCGTACCGGTGATCCTGATGGTCGAGAGATGTTCGGCAGGCGCCTGGAGTTTTGGAGGGCTCCTGCGTCTTATGCGCCGGACGCCACTGCAGGAGTGCCGGTGAGATCGGAGTACAAGGGATACAAGCTGGAGAATGTAGACGTGGTGGTGGGCGAGAAGAGAAAGATGCGGACAGAGAAGAAACCGCTGATGATCGATCTTAACCAACCACCGCCCTTGTTCTGA 567 0.5855 MAVDALQLPRDSLPDPPPLPPMSHRFAAPASSSKDAHFRGVRKRPWGRFAAEIRNPWKKTRKWLGTFDTAEEAARAYDDAARTLRGPRAKTNFVYAPVSVAPLVPMSPPNSSFSRTGDPDGREMFGRRLEFWRAPASYAPDATAGVPVRSEYKGYKLENVDVVVGEKRKMRTEKKPLMIDLNQPPPLF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1796 188 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 30 117 - -
Acco02g1796 188 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Acco02g1796 188 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Acco02g1796 188 Gene3D AP2/ERF domain 36 95 IPR036955 GO:0003700|GO:0006355
Acco02g1796 188 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Acco02g1796 188 SUPERFAMILY DNA-binding domain 37 94 IPR016177 GO:0003677
Acco02g1796 188 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Acco02g1796 188 MobiDBLite consensus disorder prediction 1 39 - -
Acco02g1796 188 FunFam Ethylene-responsive transcription factor 2 36 95 - -
Acco02g1796 188 CDD AP2 36 93 IPR001471 GO:0003700|GO:0006355
Acco02g1796 188 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1796 Acco-ChrAcco02 14107605 14108171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1796 34 187 AP2-EREBP Transcription Factor Family AT5G44210 42.353 1.31e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco02g1796 AP2 1.6e-13 CL0081