Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1795 ATGAAGGTTGATGTGCCTGTGACTTTGAATTTCAAATCAAAATTTGCCAATGCGCCCAAGTGCCATGATATGGACACCTATACATATTCGCGGCTCTTACCTTCACTACGAAACCCTAAAGTAACGAGCGCCCCTATCAGCACCCCAATCTTCTTGTTTTCAGGTCGCAGCCATGGTAGAGCCCTTAGCTCTCTCAAATACGCTACTCTTTTCCCCTGTCCTACGATCATTACTCACTATTGTCATTTTTCGTGTGTTTTTCAGGCGGATGTTGAAGCAGATGTTGCACCAGGACAGCCCAAGAAGAGAACGTTCAAGAAGTTCAGTTTCAGAGGAGTTGATCTGGATGCACTCTTGGACATGTCTACTGATGAGCTTGTTAAGCTCTTCACAGCTCGCGCTCGTAGAAGGTTTCAACGTGGTTTGAAACGGAAGCCTATGGCATTGATAAAGAAGCTTCGTAAGGCGAAACGTGAGGCCCCACCTGGTGAAAAGCCAGAGCCAGTAAGGACTCATCTCCGGAACATGATAATTGTTCCCGAAATGATTGGCAGCATTATCGGTGTCTACAATGGGAAGACCTTCAATCAAGTTGAAATTAAACCTGAAATGATCGGTCACTATCTTGCTGAATTCTCAATCAGTTACAAGCCTGTTAAGCACGGAAGGCCCGGTATTGGTGCTACTCACTCCTCAAGGTTTATTCCTCTTAAATGA 717 0.4519 MKVDVPVTLNFKSKFANAPKCHDMDTYTYSRLLPSLRNPKVTSAPISTPIFLFSGRSHGRALSSLKYATLFPCPTIITHYCHFSCVFQADVEADVAPGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1795 238 FunFam 40S ribosomal protein S15 95 238 - -
Acco02g1795 238 Hamap 30S ribosomal protein S19 [rpsS]. 134 227 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco02g1795 238 PRINTS Ribosomal protein S19 family signature 203 218 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco02g1795 238 PRINTS Ribosomal protein S19 family signature 191 203 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco02g1795 238 PRINTS Ribosomal protein S19 family signature 171 190 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco02g1795 238 Pfam Ribosomal protein S19 136 221 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco02g1795 238 ProSitePatterns Ribosomal protein S19 signature. 191 215 IPR020934 GO:0003723
Acco02g1795 238 SUPERFAMILY Ribosomal protein S19 142 222 IPR023575 GO:0003735|GO:0005840|GO:0006412
Acco02g1795 238 Gene3D 30s Ribosomal Protein S19; Chain A 96 238 IPR023575 GO:0003735|GO:0005840|GO:0006412
Acco02g1795 238 NCBIfam 30S ribosomal protein S19 105 238 IPR005713 GO:0003735|GO:0006412|GO:0015935
Acco02g1795 238 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 97 238 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1795 Acco-ChrAcco02 14102169 14105338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1795 89 238 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 86.667 5.35e-89 258