Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1793 ATGCTTCGTGGATCACTATTCTTGAATCACGTTTGCGCTTTCGTCCTTTGGAAACCTAATTTTGCTGAGCTGATAGCCTCCTCCATATCCAAACGCCATTTAACCCTCCGTGCACAGACCTCGAATCCCGCAATTATAGTTGGAATGTCTGGGGAAGGCTTTGATGGACAGGATGCGGGCTATGTACCTGAGAACCCCGATTTTCCTCAAAATCACTCTGTTGAACATGATGCAGAAGTGATTGATAATACTGAATTTCCTGAACAAGAGTCTGTAGAACATGATGCGGGCAATGTAGTTGAGGAATACAATCCTCCAGACAATCATTTGGATGAAGTTGATGCTGGAGATTTGCCCAAAAATTCTGAATCTCCACAAAAGCATATTGATGAACATCATGATGTTGGAGATATACCTGAGAGTTTTGATTCTCAGAAGCAGGAACATGACTTAGATTCAAAAGGAACTGAAATAAAACGGTGGCCTGGTTGGCCTGGAGAGAATGTGTTTAGAATGTTGGTTCCTGTTCAGAAGGTTGGCAGTATTATTGGCCGCAAGGGGGAATTTATTAAGAAAATTACCGAAGAGACAAAAGCTCGTATTAAAATACTTGATGGTCCCCCTGGAACCTCAGAAAGAGCTGTAATGGTATCTGCAAAAGAGGAGCCAGATCGCACCATACCGCCTGCAGTTGATGGCTTGTTAAGGGTTCATAAACAAATTGTCAATGTCGACCGTGATCCTGCTGATAGCACATCTGTTGGTGGGCGCTCAATTGTTACAAGACTTCTTGTTGCTGATACTCAAGCAGGAAGCTTGATTGGGAAGCAGGGGTCTACTATAAAATCCATTCAAGATACATCTGGTTGTACCATACGAGTCCTTGGATCAGAGCACCTGCCAGTTTTTGCTCTGCGAGATGATAGTGTTGTTGAAATACAAGGTGAATCTTCTGGAGTTCACAAGGCAGTTGAATTAATTGCAACTCATCTAAGAAAATTCTTGGTAGATCGAAGCATAGTTGGAGTGTTTGAAACACAGATGCAATCGCCAGATGTTCGACCCAACCAGAATGTGCCACCACACCAGCCATGGGGTCCTCCTCCTCAAGGATTTCCTGCTCCTGCAGCTGGTGGACCTCCATTTGCTCCGAACCCGCAATATATGCCACCTTCACATCACTACGATAACTATTACCCACCTGCTGATCTGCCTCCTATTGACAAGCACCTTCATCAGGGACCACCGGCCTATGGAAGGGATGCTCCTATGGTGCCCAGTTCACAACCACAACAATCTGTTGTGACCAAGGTTACACAGCATATGCAAATTCCTCTGTCCTATGCAGATGCAGTTATTGGAACATCAGGTGCAAACATCAGTTACATTAGGCGTGCTAGTGGAGCAAGTATTACAATTCAGGAGACAAGGGGTGTGCCAGGGGAGATGACTGTTGAAATAAGTGGGACTGCTTCACAAATACAGACTGCTCAACAGCTGGTTCAGAATTTCATGGCTGAAGCTGCAAGCGCGGCACAAGATCAGATGGGGGGATCAACAGTTGGGCAAGGCTACAATTCGTATCCAGCAAATGCTCCTGTGTATGCATCTCCACCCTCAAACGCTGGTGGCCATACAGGCCACGCCCCTGCTGCTGATTATGGTCCTGTATACGGCACCAATTATGGCTATTGA 1695 0.456 MLRGSLFLNHVCAFVLWKPNFAELIASSISKRHLTLRAQTSNPAIIVGMSGEGFDGQDAGYVPENPDFPQNHSVEHDAEVIDNTEFPEQESVEHDAGNVVEEYNPPDNHLDEVDAGDLPKNSESPQKHIDEHHDVGDIPESFDSQKQEHDLDSKGTEIKRWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGTSERAVMVSAKEEPDRTIPPAVDGLLRVHKQIVNVDRDPADSTSVGGRSIVTRLLVADTQAGSLIGKQGSTIKSIQDTSGCTIRVLGSEHLPVFALRDDSVVEIQGESSGVHKAVELIATHLRKFLVDRSIVGVFETQMQSPDVRPNQNVPPHQPWGPPPQGFPAPAAGGPPFAPNPQYMPPSHHYDNYYPPADLPPIDKHLHQGPPAYGRDAPMVPSSQPQQSVVTKVTQHMQIPLSYADAVIGTSGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQTAQQLVQNFMAEAASAAQDQMGGSTVGQGYNSYPANAPVYASPPSNAGGHTGHAPAADYGPVYGTNYGY 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1793 564 CDD KH-I_PEPPER_like_rpt3 437 505 - -
Acco02g1793 564 ProSiteProfiles Type-1 KH domain profile. 258 327 - -
Acco02g1793 564 Gene3D K Homology domain, type 1 426 513 IPR036612 GO:0003723
Acco02g1793 564 MobiDBLite consensus disorder prediction 106 154 - -
Acco02g1793 564 Coils Coil 564 564 - -
Acco02g1793 564 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 257 341 IPR036612 GO:0003723
Acco02g1793 564 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 159 525 - -
Acco02g1793 564 SMART kh_6 436 506 IPR004087 GO:0003676
Acco02g1793 564 SMART kh_6 166 246 IPR004087 GO:0003676
Acco02g1793 564 SMART kh_6 257 332 IPR004087 GO:0003676
Acco02g1793 564 Pfam KH domain 439 502 IPR004088 GO:0003723
Acco02g1793 564 Pfam KH domain 261 328 IPR004088 GO:0003723
Acco02g1793 564 Pfam KH domain 170 222 IPR004088 GO:0003723
Acco02g1793 564 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 427 508 IPR036612 GO:0003723
Acco02g1793 564 CDD KH-I_PEPPER_rpt1_like 167 235 - -
Acco02g1793 564 MobiDBLite consensus disorder prediction 350 394 - -
Acco02g1793 564 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 162 221 IPR036612 GO:0003723
Acco02g1793 564 ProSiteProfiles Type-1 KH domain profile. 437 501 - -
Acco02g1793 564 ProSiteProfiles Type-1 KH domain profile. 167 234 - -
Acco02g1793 564 MobiDBLite consensus disorder prediction 357 388 - -
Acco02g1793 564 CDD KH-I_PEPPER_rpt2_like 260 332 - -
Acco02g1793 564 Gene3D - 167 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1793 Acco-ChrAcco02 14070973 14079351 Dispersed