Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1784 ATGGAGTCCAGGTACACAGAAGAGTCAAAGAGCTGGAGCGAAGAAAGTGGTGATGATCGATCGGAGCATAATGAAGAAAGGGAAATTAGTACAGGAAGATCATACGGGTGTGTGTTTTGCAAGAGAGGGTTCACCACAGCACAAGCCCTAGGTGGCCACATGAATATTCACAGGAAAGATAGAGCCAAGTCCACCAAACCCAGTTTTTCTGCTTCCACTTCAACCAAAATAATTGAAGACCACGAGATCGACCATGCAATTTCAAGTCTCCCACCTGGGAATTATTTTTCTTCTGAGGTAGATAATAACAGCAATTATAATTATAATTACCCTCCCTCCCAATTTGCTTTTCCTGCAGAACAGTACTGTGATCAAAGGGATCGGGACGTGTTTGGAGGAGATTATAATTGGATGACGGGTTTGAGTTTGTCTGATCCACTTTATGTGAGCGATAATAAAGATAAGATAAGAAGTAGCAACGAGGAAGATGGTCTGGATTTGGAGCTACGGTTGGGTTATCATTCCTAA 528 0.4242 MESRYTEESKSWSEESGDDRSEHNEEREISTGRSYGCVFCKRGFTTAQALGGHMNIHRKDRAKSTKPSFSASTSTKIIEDHEIDHAISSLPPGNYFSSEVDNNSNYNYNYPPSQFAFPAEQYCDQRDRDVFGGDYNWMTGLSLSDPLYVSDNKDKIRSSNEEDGLDLELRLGYHS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1784 175 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Acco02g1784 175 Gene3D Classic Zinc Finger 7 89 - -
Acco02g1784 175 MobiDBLite consensus disorder prediction 1 29 - -
Acco02g1784 175 PANTHER OS07G0101800 PROTEIN 6 174 - -
Acco02g1784 175 SUPERFAMILY beta-beta-alpha zinc fingers 33 61 IPR036236 -
Acco02g1784 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1784 Acco-ChrAcco02 13939947 13940474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1784 35 108 C2H2 Transcription Factor Family AT5G43540 44.595 1.55e-13 62.8