Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1779 ATGGATAATCCTCAAAAGCCATGGAAGGCAGAGTACGCGAAGTCAGGACGATCGTCTTGCAAGACTTGCAAGAATGCCATCAACAAAGAGACGTTTCGCCTTGGCAAGATGGTTAAAGCCACCCAGTTCGATGGTCTCATGCCGATGTGGCATCATGCTGGTTGTATATGGAAGAAACCAAAACAGATAAAATCAATTGATGATGTTGAGGGCATAGAGGGGCTCCGTTGGGAAGATCAACAAAAAATCAGAGAATATGTAGAGTGCGTTTCACAACAGAAGTCAAATAGTAGTAAAGATATGGAGCATGGTATTGAAGTTTCACAAACTTCTCGTGCTACGTGTAAGCATTGTGCTAAAAAGATAATCAAAGGAGAGGTTCGTATATCTAGTAAGCCTGATGGTCAAGGTGCTAAAGGATTGGCTTGGCATCATGCAAACTGTCTTATGGACTTATCCCCATCAATACAAGTCGAAAAGTTGTCTGGATGGGATGCTCTCTCACCTTCTGATCAATCTGCTGTCAATGCTGTAGCAAAGAAACTTCATTATAAGCAGGGAGACATTGAGGGTCAAGAGGTTAAGGATGCCGGATCTAAAGCTGGCTCAAAACGCAGGAATGAAGCCAGTAGTAATTCCAAGTCAAAAGTTGTTAAGGCTGAGGGAGATGCTTCTGATCTGAAGAATAGACTGGAGTCCCAAACCAAAGAATTCTGGACTCTTAAAGATGATCTGAAAAAGCATGTGACAACTGCTGAGTTACGTCTAATGCTGGAAACCAATAGTCAAGATTCAACAGGATCAGAACTTGATTTGCGTGACCGCTGTGCCGATGGAATGATGTTTGGACCTCTTGCGTGTTGCCCAATATGTTCTGGTTCTATCCGATATTCTGGAGGAATGTACCGGTGCCACGGTTATGTTTCTGAATGGAGCAAGTGTTCCTACTCTAGTAAGGAACCCGTACGAGTTAGACAGAAGTGGAAATTTCCAGAGGGAACAGACAATCAGTACCTTAAACAGTGGTTCAAATCACAAAAGGCTGAGAAACCGGTTAGGATGGTGCCTCCAAGTTCGTCATCAAATTCTGAAAGTCAAATCCTTGCTTCCCAGCATCAATCTGAAAACAGTGAAAATTTGGGAGAATTGAGAGTTGCCATCACTGGATATCCTAAAGAATCTATTGTGAAGTGGAAAAGCAAAGTTAAGGAGGTTGGCGGTGTGCTTCATGCTAAAGTAAAGAAAGATTCTAGCTGCTTGGTTGTGATTGGGGCACTGGATGAGCAAGATGCTGAAATACGGAAGGCAAAGAGGATGAAAGTACCTATAGTCAGAGAGAATTATCTGGTTGATTGTGTGGAAAGAAAGAAGAAGCTTCCGGTTACCTTATACAAGGTTGAAGCAGCTAGTGAAGCCTCTAAAATGGCCACCATCAAAGTGAAGGGTCGAAGTGCTGTTCATGAGGCCTCTGGCCTACAGGATTCTGGTCACATACTGGAGGAAGGAAAAAGCATATTTAATACAACTCTGAATTTGTCTGACTTATCAAGTGGTGTTAACAGCTACTACATTATCCAGATAATTCAAGAGGATAAAGGATCAGATTGCTGTGTATACCGTAAATGGGGTCGAGTTGGTAATGACAAAATTGGGGGAGATAAGCTGGATTGGATGCCAAAAGCAGCTGCCATTGCCCAATTCAAACGATTATTCTTTGAGAAGACTGGAAACCCTTGGGAGGCTTGGGAACAAAAGGATTTACATAAGCAACCAGGAAAATTTTACCCATTAGATATTGATTATGGGGTTAAGGAACGGGGTACAAAGAAAAATAAAAAAGAAGCAGACAGTAAGCTGGCCCCTCCATTACTAGAATTGATGAAGATGCTTTTCAATGTGGAAACATACAGGGCTGCCATGATGGAATTTCAGATAAACATGTCTGAAATGCCACTCGGGAAGCTGAGCAAAAGTAATATTCAAAAAGGGTTTGAAGCTTTAACTGATATACAGAATCTGTTAAGTAATAGCAATCCCGATCCTTCAGTCAGAGATAGCTTACTTATTGATGCCAGCAATCGGTTTTTCACTGTAATCCCTTCTATTCATCCGCATATTATTAGGGACGAGGAAGTTTTGAAGTCAAAGGTGAAAATGTTAGAATCACTTCAAGACATTGAAATAGCTTCAAGATTAGTTGGATTTGATGTAGATGGTGATGACTCCATTGATGATAAGTATGAGAAACTTCACTGTCACATTGCTCCACTTCCTCATGATAGTGAAGATTATCATCTAATTGAGAAGTTTCTCCATACTACTCATGCCCCTACACATACGGATTGGAGTCTTGAGCTAGAAGAAGTTTTTGCACTTGAAAGGGAAGGAGAATTTGACAAGTATGCCCCTTACAGAGAAAAGCTCGGTAACAGAATGCTTCTATGGCATGGGTCCAGATTTACAAATTTTGTGGGCATACTTAGCCAAGGACTGAGAATTGCACCTCCTGAAGCCCCAGCAACTGGCTATATGTTTGGCAAAGGCATATACTTTGCTGACCTGGTCAGCAAAAGTGCTCAGTATTGCTTCACTGATAAGAAAAATCCTGTTGGTCTGTTGCTTTTGAGCGAAGTTGCCCTTGGAAATGTCTACGAGCTTAAGAATGCCAAGTATATGGATAAACCTCCGGAAGGAAAGCATTCTACTAAAGGGTTGGGCAAGAAGGTACCTGAAGAATCAGAATTTGTAACGTGGAGAGATGATGTCATTGTTCCTTGTGGAAAGCCAGTGTCGTCAAGAGTCAAGACTTCTGAGCTCATGTACAACGAGTTTATTGTTTACAATACTGCTCAAGTTAAGATGCAGTTCTTGTTGAAGGTGAGGTTCCATCACAAGAGATGA 2901 0.4164 MDNPQKPWKAEYAKSGRSSCKTCKNAINKETFRLGKMVKATQFDGLMPMWHHAGCIWKKPKQIKSIDDVEGIEGLRWEDQQKIREYVECVSQQKSNSSKDMEHGIEVSQTSRATCKHCAKKIIKGEVRISSKPDGQGAKGLAWHHANCLMDLSPSIQVEKLSGWDALSPSDQSAVNAVAKKLHYKQGDIEGQEVKDAGSKAGSKRRNEASSNSKSKVVKAEGDASDLKNRLESQTKEFWTLKDDLKKHVTTAELRLMLETNSQDSTGSELDLRDRCADGMMFGPLACCPICSGSIRYSGGMYRCHGYVSEWSKCSYSSKEPVRVRQKWKFPEGTDNQYLKQWFKSQKAEKPVRMVPPSSSSNSESQILASQHQSENSENLGELRVAITGYPKESIVKWKSKVKEVGGVLHAKVKKDSSCLVVIGALDEQDAEIRKAKRMKVPIVRENYLVDCVERKKKLPVTLYKVEAASEASKMATIKVKGRSAVHEASGLQDSGHILEEGKSIFNTTLNLSDLSSGVNSYYIIQIIQEDKGSDCCVYRKWGRVGNDKIGGDKLDWMPKAAAIAQFKRLFFEKTGNPWEAWEQKDLHKQPGKFYPLDIDYGVKERGTKKNKKEADSKLAPPLLELMKMLFNVETYRAAMMEFQINMSEMPLGKLSKSNIQKGFEALTDIQNLLSNSNPDPSVRDSLLIDASNRFFTVIPSIHPHIIRDEEVLKSKVKMLESLQDIEIASRLVGFDVDGDDSIDDKYEKLHCHIAPLPHDSEDYHLIEKFLHTTHAPTHTDWSLELEEVFALEREGEFDKYAPYREKLGNRMLLWHGSRFTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLLLLSEVALGNVYELKNAKYMDKPPEGKHSTKGLGKKVPEESEFVTWRDDVIVPCGKPVSSRVKTSELMYNEFIVYNTAQVKMQFLLKVRFHHKR 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1779 966 FunFam Poly [ADP-ribose] polymerase 609 750 - -
Acco02g1779 966 PANTHER DNA LIGASE 102 964 - -
Acco02g1779 966 SMART BRCT_7 378 456 IPR001357 -
Acco02g1779 966 ProSiteProfiles Generated from MSF file: '/work/www/psmaker/tmp/pfmake.input.483415'. 219 357 IPR047572 GO:0008270
Acco02g1779 966 Pfam BRCA1 C Terminus (BRCT) domain 386 453 IPR001357 -
Acco02g1779 966 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 617 751 IPR036616 GO:0003950
Acco02g1779 966 SUPERFAMILY BRCT domain 377 466 IPR036420 -
Acco02g1779 966 ProSiteProfiles Zinc finger poly(ADP-ribose) polymerase (PARP)-type profile. 103 183 IPR001510 GO:0003677|GO:0008270
Acco02g1779 966 ProSiteProfiles PARP alpha-helical domain profile. 616 734 IPR004102 GO:0003950
Acco02g1779 966 ProSiteProfiles WGR domain profile. 495 594 IPR008893 -
Acco02g1779 966 ProSitePatterns Zinc finger poly(ADP-ribose) polymerase (PARP)-type signature. 20 55 IPR001510 GO:0003677|GO:0008270
Acco02g1779 966 PIRSF NAD_ADPRT 1 966 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Acco02g1779 966 ProSiteProfiles Zinc finger poly(ADP-ribose) polymerase (PARP)-type profile. 8 91 IPR001510 GO:0003677|GO:0008270
Acco02g1779 966 FunFam Poly [ADP-ribose] polymerase 210 283 - -
Acco02g1779 966 SUPERFAMILY WGR domain-like 473 599 IPR036930 -
Acco02g1779 966 CDD parp_like 617 961 - -
Acco02g1779 966 SMART PADR1_2 272 325 IPR012982 GO:0008270
Acco02g1779 966 Pfam WGR domain 507 584 IPR008893 -
Acco02g1779 966 ProSiteProfiles PARP catalytic domain profile. 741 966 IPR012317 GO:0003950
Acco02g1779 966 FunFam Poly [ADP-ribose] polymerase 2 104 - -
Acco02g1779 966 SMART WGR_cls 506 589 IPR008893 -
Acco02g1779 966 MobiDBLite consensus disorder prediction 355 376 - -
Acco02g1779 966 Pfam Poly(ADP-ribose) polymerase catalytic domain 761 962 IPR012317 GO:0003950
Acco02g1779 966 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 101 189 - -
Acco02g1779 966 MobiDBLite consensus disorder prediction 190 212 - -
Acco02g1779 966 MobiDBLite consensus disorder prediction 349 376 - -
Acco02g1779 966 FunFam Poly [ADP-ribose] polymerase 373 476 - -
Acco02g1779 966 FunFam Poly [ADP-ribose] polymerase 751 966 - -
Acco02g1779 966 Gene3D BRCT domain 370 476 IPR036420 -
Acco02g1779 966 CDD WGR_PARP1_like 496 601 - -
Acco02g1779 966 Gene3D - 607 750 IPR036616 GO:0003950
Acco02g1779 966 SUPERFAMILY ADP-ribosylation 750 965 - -
Acco02g1779 966 MobiDBLite consensus disorder prediction 190 225 - -
Acco02g1779 966 SMART zf_PARP_3 11 88 IPR001510 GO:0003677|GO:0008270
Acco02g1779 966 SMART zf_PARP_3 106 180 IPR001510 GO:0003677|GO:0008270
Acco02g1779 966 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 106 177 IPR001510 GO:0003677|GO:0008270
Acco02g1779 966 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 11 87 IPR001510 GO:0003677|GO:0008270
Acco02g1779 966 Gene3D - 209 283 - -
Acco02g1779 966 Gene3D - 284 344 IPR038650 -
Acco02g1779 966 Gene3D - 751 966 - -
Acco02g1779 966 Gene3D - 99 202 IPR036957 GO:0003677|GO:0008270
Acco02g1779 966 Gene3D - 1 98 IPR036957 GO:0003677|GO:0008270
Acco02g1779 966 Pfam Poly(ADP-ribose) polymerase, regulatory domain 617 747 IPR004102 GO:0003950
Acco02g1779 966 Coils Coil 217 237 - -
Acco02g1779 966 ProSiteProfiles BRCT domain profile. 375 466 IPR001357 -
Acco02g1779 966 Pfam PADR1 (NUC008) domain 274 323 IPR012982 GO:0008270
Acco02g1779 966 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1779 Acco-ChrAcco02 13903025 13911685 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1779 02 13903025 13911685 Acco06g0613 06 3940163 3940853 CCT
Acco02g1779 02 13903025 13911685 Acco02g1779 02 13903025 13911685 ECH