Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1777 ATGGCTTGTTCTGGAAGTAATGCTGGTGGAGGGTCGTCTGGGTCTCCTTGCGGGGCATGCAAGTTCCTGAGAAGGAAGTGTGCTTCTGATTGCATATTTGCTCCTTATTTCGGCTCTGAACAAGGCCCTTCTAGTTTTGCTGCTATACATAAGGTTTTTGGAGCTAGTAATGTTTCTAAGCTGCTCTTGAACTTGCCTCCTCATGATCGTTGTGAGGCTGTCCTCACTATTGCCTATGAAGCTCAGGCTCGTATCAGAGACCCTGTTTATGGCTGTGTCTCTCACATTTTTGCCTTACAACAACAGGTGGCATGCTTGCAAGCACAGTTGATGCAAGCCAAGGCACAGTTAGCTCAGAAGAGCATAGAGAATAATGAAGATTACTGGGGAAGGAATATTAATAATGCTTATGGGCAAACAATATTGAATCCAATCTATGGCACTAATAATTACACCAACATGAACCCTATTTCTCCTCAGAGTTCTCTTGACTCTATTGATTACTCAACCATCCATGATGGCTCATCTTCTTCCACGAGTTTGCAACAGGAGGGTTTCTCTTTCTACCAGCAACCTCGCTCCAAGAAAAGTCCGTCTTATGATAGCAATGACTTGAGCGAGCTTCAAGAGCTAGCTCTCAGAATGATGAGAAATTAG 657 0.4399 MACSGSNAGGGSSGSPCGACKFLRRKCASDCIFAPYFGSEQGPSSFAAIHKVFGASNVSKLLLNLPPHDRCEAVLTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQLAQKSIENNEDYWGRNINNAYGQTILNPIYGTNNYTNMNPISPQSSLDSIDYSTIHDGSSSSTSLQQEGFSFYQQPRSKKSPSYDSNDLSELQELALRMMRN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1777 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 191 - -
Acco02g1777 218 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
Acco02g1777 218 MobiDBLite consensus disorder prediction 165 203 - -
Acco02g1777 218 Pfam Lateral organ boundaries (LOB) domain 16 114 IPR004883 -
Acco02g1777 218 Coils Coil 96 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1777 Acco-ChrAcco02 13899520 13900726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1777 1 218 AS2 family AT2G42430 54.839 1.48e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco02g1777 LOB 1.5e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1777 02 13899520 13900726 Acco02g1777 02 13899520 13900726 ECH