Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1775 ATGACAGGTTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGAGGCTGTGTATTTGCACCTTACTTTTGCCATGAACAAGGAGCTACTCATTTTGCAGCCATTCATAAGGTTTTTGGTGCAAGCAACGTCTCTAAGCTTCTTGCTCATCTCCCTGTAAGTGACCGTTGTGAAGCTGCAGTTACCATCGCATATGAAGCTCAAGCTAGGCTTCAGGATCCCATCTATGGCTGTGTTTCCCATATCTTCTCCCTTCAACAACAGGTGGTTAATTTACAAGCTCAGCTAGCTTATCTGAGGGAACAAGCAGCTCAGAGCAATGTTATGAATGTCTCTGTCCCTGAAAACCCTAATAAACTTGCTGCTTTCTCTGATCACGATATTCAAAAGTGGTTTCAGCCGGAGAATTCAAACACAGGAGGGGCTCAATTTCTTCCCAGCTCGTCTGATATGAATTCTTTTGCAACACAGTGCTATGGAAATTATACGAGTACCTTTGTGAATCCAAACCCTATTACCGAAGAAAGTGGTTCATTTTCGAGCTTTCATGATCAGGATCAGAGCAATTGTAACTCGATGTCTCTTGACAATATGCAAGCAACAAGCAGTAGGCAGTGGGGCTTTCATGAAGTGGATGATCTTCAGTCTGTGGCTTTTGGTTACAGTGGATGA 687 0.4338 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTIAYEAQARLQDPIYGCVSHIFSLQQQVVNLQAQLAYLREQAAQSNVMNVSVPENPNKLAAFSDHDIQKWFQPENSNTGGAQFLPSSSDMNSFATQCYGNYTSTFVNPNPITEESGSFSSFHDQDQSNCNSMSLDNMQATSSRQWGFHEVDDLQSVAFGYSG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1775 228 Coils Coil 87 107 - -
Acco02g1775 228 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Acco02g1775 228 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Acco02g1775 228 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1775 Acco-ChrAcco02 13881032 13881946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1775 7 213 AS2 family AT3G58190 54.673 9.84e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco02g1775 LOB 3.3e-36 No_clan