Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1770 ATGAGTTCCTCTGAGGCCAAGTCTTTACCCTTTAAGTCTAAGAAGCCCCATATTTGTCATTCAGCCTTCAAATCCCAATCACCAGATCCCATTTCACTGAACTCCAAAACTCCAGAGAAGGCGTCACAGCTATCAAGCCGTACCCGAAACCGCGGTGTTGCTCTCTCCATTAGAGAAGTCAGAAAAGTCGCTGAAAGCCTCCAAGAACAGAAAGGCCCGGGGCAAAATCATGATCGTACGGAGCATGTAAAGTCCGCTCGAAGGAAGATTGCACCTTCTTTCGCCGAAATCTCCCCCCGCAAATCCAAGGCACCTATGGATGAGCCCGTCAAGCTGCCGGAGAAGTATGAAATTTTGGGTGAGTTCTTTGACAGCTTAGATAGCTCGATCCGATTGTTGCATTTGAAAGGTTCCTCAACAACTTTCACGAATGTCAGCCCCAAAATTGAATGTTTAACAGATAGGAGATTTACGCATAGTCATCTGGCCCAGTTGAAATATATCTTTCCCGAGGCGCTTGTTGTAAAGAAGGTGCTCAGGTTTGATGAACGAACAAGTTTTATGAAGCCAGACCTCCATCTTACATTAAATCCCGATTCAAAGTTGCTTTCTGAAGGTGGAAGTGTGTCCTTGCGAAAGTTATTTCGCACACGGTTGAGAGATTTTTATGAATCACATCCTGAGGTTGATGAAATTCCTGAAGAAATACTGCCTGAGCCATTCAGTAACCGTAAGCAAGATCGTCCTTTACAAACATTGGGAACTACCTCCTCATCATTTGCTATAATACCATCAAATGATGCAATTGCACCTCATCTTCCAGCTTTAGTACCTGTATGCATGCAATATAATGCCATGGTAATCAATTCAGAGCCTACTGAGGGAGAAGGAAACTTGCCAGTGCCTGTTAACAGGTCAATAGAAGTACATCATCAGCAACCAGCAGTAGCCACTCATATGTCTCGATCTTTCAGAAGGCACTTTTCTCAGAAATCCATAAAAGATGAAGCAGATGACATGCAACAAAAGTTACCGTCAAGCTCATTACCTCCACAATCAGTCCCAGTTTCAGAGTCAAGCATGAAGATAAATTCATCAAGCGTAGATACTACGGTGTGCCCTTCTCCAGCTAATCTTAAATCATCCGGTGTTTCAGTTGCCACTCCAAATAAAGTTGTGTCTACTCCATCTAGATTGATGACTCATACACCTTCATTGCCTACCCCTAAGAGATGTTACATGAGCCCCGATGATAGCTCTTGCAGCTCACCAAAAAGATTGGTTAGGCGTGCAACTAGTTTGAAGAAGTCATTGAACTTTGACACTCCGGTTAAAAATCGCATGACAGAGACTGAAGCTGGTGGCTTATCAACTGATGATGATATTTTTGATATTCTACCGGAGAGTCTTCTCCAATCGATTAAAGAAAAGGAGAGAGTGGCGATGGAGGAAAGAAATCCGGCTATGTCACAAGCAAAAAGACGGCAAAAAATGATCGCCTGCCTGCCTAAGCTATTTAACATGATTCATCTCTTGATTCATTCAATGAATCGTTCTGTTGTCACAAAAGAGGAGCTTCTATGCAAGATAATCTCAAACCACTGTGATATTGTTGACCGGAGAGAAGTTGAAGAACAGCTGAATTTGTTGCTAGAACTAGTTCCAGAATGGATCTCTGAAAAGTTGGCATCTAGTGGAGATCTGCTTTTCTGCATAAATAAAATGCAAGACCCTGAGACCATTCGATCACAGCTTGCAGAAGCAAAGTGA 1770 0.4288 MSSSEAKSLPFKSKKPHICHSAFKSQSPDPISLNSKTPEKASQLSSRTRNRGVALSIREVRKVAESLQEQKGPGQNHDRTEHVKSARRKIAPSFAEISPRKSKAPMDEPVKLPEKYEILGEFFDSLDSSIRLLHLKGSSTTFTNVSPKIECLTDRRFTHSHLAQLKYIFPEALVVKKVLRFDERTSFMKPDLHLTLNPDSKLLSEGGSVSLRKLFRTRLRDFYESHPEVDEIPEEILPEPFSNRKQDRPLQTLGTTSSSFAIIPSNDAIAPHLPALVPVCMQYNAMVINSEPTEGEGNLPVPVNRSIEVHHQQPAVATHMSRSFRRHFSQKSIKDEADDMQQKLPSSSLPPQSVPVSESSMKINSSSVDTTVCPSPANLKSSGVSVATPNKVVSTPSRLMTHTPSLPTPKRCYMSPDDSSCSSPKRLVRRATSLKKSLNFDTPVKNRMTETEAGGLSTDDDIFDILPESLLQSIKEKERVAMEERNPAMSQAKRRQKMIACLPKLFNMIHLLIHSMNRSVVTKEELLCKIISNHCDIVDRREVEEQLNLLLELVPEWISEKLASSGDLLFCINKMQDPETIRSQLAEAK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1770 589 PANTHER DNA REPLICATION FACTOR CDT1 24 589 IPR045173 GO:0003677|GO:0030174|GO:0071163
Acco02g1770 589 Pfam DNA replication factor CDT1 like 112 198 IPR014939 -
Acco02g1770 589 MobiDBLite consensus disorder prediction 396 425 - -
Acco02g1770 589 FunFam CDT1-like protein a chloroplastic 459 589 - -
Acco02g1770 589 MobiDBLite consensus disorder prediction 54 85 - -
Acco02g1770 589 SUPERFAMILY "Winged helix" DNA-binding domain 107 241 IPR036390 -
Acco02g1770 589 MobiDBLite consensus disorder prediction 1 85 - -
Acco02g1770 589 MobiDBLite consensus disorder prediction 342 359 - -
Acco02g1770 589 MobiDBLite consensus disorder prediction 333 359 - -
Acco02g1770 589 Pfam DNA replication factor Cdt1 C-terminal domain 469 561 IPR032054 -
Acco02g1770 589 CDD Cdt1_c 465 586 IPR032054 -
Acco02g1770 589 CDD Cdt1_m 98 250 IPR014939 -
Acco02g1770 589 MobiDBLite consensus disorder prediction 25 52 - -
Acco02g1770 589 Gene3D - 459 589 IPR038090 -
Acco02g1770 589 SMART CDT1_2 112 239 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1770 Acco-ChrAcco02 13829750 13832649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1770 6 587 Core DNA Replication Machinery Family AT2G31270 40.984 3.05e-108 335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1770 02 13829750 13832649 Acco06g0617 06 3976359 3981804 CCT
Acco02g1770 02 13829750 13832649 Acco02g1770 02 13829750 13832649 ECH