Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1760 ATGGAACAGTCGCCAAAGAAAACGGCAAAGGAGGATGAACCAAAAGAAAGCAAATACAGAGGAGTACGGAGGCGGCCGTGGGGGAAATTCGCAGCGGAGATTCGAGATTCGAACCGGCACGGTGCTCGATTGTGGCTGGGTACTTTCAACACGGCGAAAGAAGCGGCGAGAGCCTACGATAGGGCTGCTTTTGGGATGAGAGGGCCTTCGGCGATTCTCAACTTCCCGGAAGAACACGGTCTGAGCAATGTGGGGAGTGGAAGGAGCAGTAGCAGCCACGTGCATCGGTCTTCTTCTTCGTCGTCGTCGTCGTCTTCAATGGTGGCGGAAGCTCAGGAAGGAAGGCCGGTGTTCGAGTTCGAGTGTTTCGATGATCAATTGCTGGATGATCTTCTTGATTATACGACCAAGAAGGAGCAAGAGTAA 426 0.5305 MEQSPKKTAKEDEPKESKYRGVRRRPWGKFAAEIRDSNRHGARLWLGTFNTAKEAARAYDRAAFGMRGPSAILNFPEEHGLSNVGSGRSSSSHVHRSSSSSSSSSSMVAEAQEGRPVFEFECFDDQLLDDLLDYTTKKEQE 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1760 141 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Acco02g1760 141 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Acco02g1760 141 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Acco02g1760 141 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Acco02g1760 141 MobiDBLite consensus disorder prediction 77 112 - -
Acco02g1760 141 SUPERFAMILY DNA-binding domain 17 77 IPR016177 GO:0003677
Acco02g1760 141 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Acco02g1760 141 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Acco02g1760 141 MobiDBLite consensus disorder prediction 1 23 - -
Acco02g1760 141 FunFam Ethylene-responsive transcription factor 2 17 77 - -
Acco02g1760 141 MobiDBLite consensus disorder prediction 83 110 - -
Acco02g1760 141 PANTHER DNA-BINDING DOMAIN 7 131 IPR044808 GO:0003700|GO:0009873
Acco02g1760 141 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1760 Acco-ChrAcco02 13745929 13746354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1760 15 138 AP2-EREBP Transcription Factor Family AT3G23230 58.065 8.84e-39 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco02g1760 AP2 8.4e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1760 02 13745929 13746354 Acco02g1760 02 13745929 13746354 ECH