Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1758 ATGGTCAGATTGGGAGTTCTGGCTGGAGCAGTTGCCCACATGGCCTCTCTTCTTTCATATTTCAACGTGGAGAAGGGATCAAAGCAGAAAACAAATAACAAAAAACAAAACAAAAAAGCAATAAATAATTATACTACAACCCTAGCCAGTATGTCTTGTCCATCGTATCAGCAGCCGTACCCAGATTGGGACTTTTGGCAGGAGACCTCTGATCCTTTCTTGGTCTCTTCATCAAGAGACCAAAGTAATGGAGACCCTTTTCATGATTATCTTTGCTTCGATATGGTTGATAGGGAAGCAAATCAAGTGCCGGTGAGTTGGGAAGCCATGGAAGCAAAGAAGACTGCGGAGAAAACATACATAGGTGTGAGGAAGAGACCTTGGGGAAAATTTGCAGCAGAGATCAGAGACAACACCAGGAATGGGGCCCGTGTTTGGCTGGGAACATTCGAAAGTGCAGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCAACAACGCTGTTCTTAATTTTCCAGTGCAAAAGGTAAAGGAGTCTCTGCAACACATCATGTATGGTTGCCGCAAAGGCTGTTCGCCTGCTTTAGCACTCAAAGAGAGGCACTATATCCAAAGAAAACTGTCGTCAAAGGCTAAGAAAGGCAAAACCAAACAGAAATCATCAGAGGTGGTGGTGCTAGAGGACTTGGGTGTTGACTATCTGGAGCAACTTCTCACCCTCTCTGATCAGACTACAAGCTAG 756 0.4511 MVRLGVLAGAVAHMASLLSYFNVEKGSKQKTNNKKQNKKAINNYTTTLASMSCPSYQQPYPDWDFWQETSDPFLVSSSRDQSNGDPFHDYLCFDMVDREANQVPVSWEAMEAKKTAEKTYIGVRKRPWGKFAAEIRDNTRNGARVWLGTFESAEEAALAYDQAAFTMRGNNAVLNFPVQKVKESLQHIMYGCRKGCSPALALKERHYIQRKLSSKAKKGKTKQKSSEVVVLEDLGVDYLEQLLTLSDQTTS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1758 251 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Acco02g1758 251 PRINTS Ethylene responsive element binding protein signature 120 131 IPR001471 GO:0003700|GO:0006355
Acco02g1758 251 CDD AP2 120 179 IPR001471 GO:0003700|GO:0006355
Acco02g1758 251 SUPERFAMILY DNA-binding domain 119 178 IPR016177 GO:0003677
Acco02g1758 251 Pfam AP2 domain 120 169 IPR001471 GO:0003700|GO:0006355
Acco02g1758 251 Gene3D AP2/ERF domain 118 179 IPR036955 GO:0003700|GO:0006355
Acco02g1758 251 SMART rav1_2 119 183 IPR001471 GO:0003700|GO:0006355
Acco02g1758 251 ProSiteProfiles AP2/ERF domain profile. 119 177 IPR001471 GO:0003700|GO:0006355
Acco02g1758 251 FunFam Ethylene-responsive transcription factor 2 118 179 - -
Acco02g1758 251 PANTHER DNA-BINDING DOMAIN 45 244 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1758 Acco-ChrAcco02 13724333 13725552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1758 96 249 AP2-EREBP Transcription Factor Family AT3G23240 53.797 1.21e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco02g1758 AP2 6.9e-15 CL0081