Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1757 ATGTCTTGTCCATCCTATCAGCAGCCATACCCAGATTGGGACTTTTGGCAGGAGACCTCTGATCCTTTCTTGGTCTCTTCATCAAGAGACCAAAGTAGTGGAGACCCTTTTCATGATTATCTTTGCTTCGATATGGATGACAGGGAAGCAAATCAAGTGCCGATGAGTTGGGAAGCCATGGAAGCAAAGAAGACTGTGGAGAAAACATACATAGGTGTGAGGAAGAGACCTTGGGGAAAATTTGCCGCAGAGATCAGAGACAACACCAGGAATGGAGCCAGAGTTTGGCTGGGAACATTCGAAAGTGCAGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACAATGAGAGGCAACAACGCTGTTCTGAATTTTCCAGTGCAAAAGGTGAAGGAGTCTCTGCAACACATCATGTATGGTTGCCGCAAAGGCTGTTCGCCTGCTTTAGCACTCAAAGAGAGGCACTATATCCAAAGAAAACTGTCGTCAAAGGCTAAGAAAGGCAAAACCAAACAGAAATCATCAGAGGTGGTGGTCCTAGAGGACTTGGGTGTTGACTATCTGGAGCAACTTCTCACCCTCTCTGATCAGACTACAAGCTAG 606 0.4653 MSCPSYQQPYPDWDFWQETSDPFLVSSSRDQSSGDPFHDYLCFDMDDREANQVPMSWEAMEAKKTVEKTYIGVRKRPWGKFAAEIRDNTRNGARVWLGTFESAEEAALAYDQAAFTMRGNNAVLNFPVQKVKESLQHIMYGCRKGCSPALALKERHYIQRKLSSKAKKGKTKQKSSEVVVLEDLGVDYLEQLLTLSDQTTS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1757 201 CDD AP2 70 129 IPR001471 GO:0003700|GO:0006355
Acco02g1757 201 ProSiteProfiles AP2/ERF domain profile. 69 127 IPR001471 GO:0003700|GO:0006355
Acco02g1757 201 FunFam Ethylene-responsive transcription factor 2 68 129 - -
Acco02g1757 201 Pfam AP2 domain 70 119 IPR001471 GO:0003700|GO:0006355
Acco02g1757 201 SUPERFAMILY DNA-binding domain 69 128 IPR016177 GO:0003677
Acco02g1757 201 PANTHER DNA-BINDING DOMAIN 54 194 IPR044808 GO:0003700|GO:0009873
Acco02g1757 201 Gene3D AP2/ERF domain 68 129 IPR036955 GO:0003700|GO:0006355
Acco02g1757 201 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Acco02g1757 201 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Acco02g1757 201 SMART rav1_2 69 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1757 Acco-ChrAcco02 13692269 13692874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1757 47 199 AP2-EREBP Transcription Factor Family AT3G23240 54.140 3.60e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco02g1757 AP2 4.7e-15 CL0081