Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1754 ATGTCTTGTTCGTCAACGCAGAAGCCATTCCCAGATTGGGAGTTTTGGCAGCAGGAGACCTATGATCCTTTTTTGGTCTCTTCATCAAGCGACCAAATTCATGCAGACCCTTTCCATGATCATCTTTGCTTCGATATGGTTGACAGGGAGGCAAATCAAGCGCCGGTGAGTAGGGAAGAAATCGGAGGAAAGAAGACTGGGGAAGAGGAAAAAACATACATAGGGGTGAGAAAGAGACCTTGGGGAAAATTTGCAGCAGAGATCAGAGACACCACCAGGAATGGTATCAGAGTTTGGCTGGGAACGTTTGAGAGTGCAGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCAACAAAGCTGTTCTTAATTTTCCAGTGCAAAAGGTGAAGGACTCTCTGCAGCACATCCAATTTGGTTGCCGTGAAGGGTGTTCGCCTGCTTTAGCCCTAAAGGAGAGGCACTACATCCAAAGAAAACTGTCGTCAAAGGTTAAGCATGGCAAAGCCAAACAAAAATTATCAGACGTGGTGGTGCTTGAGGACTTGGGTGTTGCATATCTGGAGCAACTTCTCACCCTCTCTGATCAAACTACAAGCTAG 615 0.4683 MSCSSTQKPFPDWEFWQQETYDPFLVSSSSDQIHADPFHDHLCFDMVDREANQAPVSREEIGGKKTGEEEKTYIGVRKRPWGKFAAEIRDTTRNGIRVWLGTFESAEEAALAYDQAAFTMRGNKAVLNFPVQKVKDSLQHIQFGCREGCSPALALKERHYIQRKLSSKVKHGKAKQKLSDVVVLEDLGVAYLEQLLTLSDQTTS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1754 204 SUPERFAMILY DNA-binding domain 72 131 IPR016177 GO:0003677
Acco02g1754 204 FunFam Ethylene-responsive transcription factor 2 71 132 - -
Acco02g1754 204 Pfam AP2 domain 73 122 IPR001471 GO:0003700|GO:0006355
Acco02g1754 204 PANTHER DNA-BINDING DOMAIN 61 197 IPR044808 GO:0003700|GO:0009873
Acco02g1754 204 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Acco02g1754 204 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Acco02g1754 204 ProSiteProfiles AP2/ERF domain profile. 72 130 IPR001471 GO:0003700|GO:0006355
Acco02g1754 204 SMART rav1_2 72 136 IPR001471 GO:0003700|GO:0006355
Acco02g1754 204 CDD AP2 73 132 IPR001471 GO:0003700|GO:0006355
Acco02g1754 204 Gene3D AP2/ERF domain 71 132 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1754 Acco-ChrAcco02 13641913 13642527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1754 47 202 AP2-EREBP Transcription Factor Family AT3G23240 52.500 3.86e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco02g1754 AP2 9.3e-14 CL0081