Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1753 ATGTCATCGCCGTCAACGCAGCAGCCATTCCCAGATTGGGAGTTTTGGCAGGACACCTCTGATCCTTTCTTGGTCTCTTCATCAAGAGATCAAGTTCATGGAGACCCTTTCCACGATTATCTTTGCTTCGATATGATCGACAGGGAGGCAAATCAAGCGCCGGCGAGTTGGGAAGGCATTGGAGCAAAGAAGACTGTTGAGGAAAAGACATACATAGGGGTGAGGAAGAGGCCTTGGGGAAAATTTGCAGCAGAGATCAGAGACACCACCAGGAATGGTATCAGAGTTTGGTTGGGAACATTCGAGAGTGCCGAGGAGGCTGCTTTAGCTTACGACCAAGCTGCATTCACCATGAGAGGCAACAACGCTGTTCTTAATTTTCCAGTGCAGAAGGTGAAGGAATCTCTACAACACATCCAGTATGGTTGCCGCGAAGGGTATTCGCCTGCTTTAGCACTCAAAGAGAGACACTACATCCAAAGAAAACTGTCGTCAAAGGCTAAGAAAGGCAAAGCCAAACAGCAATCATCAGAGGTGGTGGTGCTTGAGGACTTGGGTGCTGAATATCTGGAGCAACTTCTCACCATTTCTGATCAAACTACTGGCTAG 609 0.4811 MSSPSTQQPFPDWEFWQDTSDPFLVSSSRDQVHGDPFHDYLCFDMIDREANQAPASWEGIGAKKTVEEKTYIGVRKRPWGKFAAEIRDTTRNGIRVWLGTFESAEEAALAYDQAAFTMRGNNAVLNFPVQKVKESLQHIQYGCREGYSPALALKERHYIQRKLSSKAKKGKAKQQSSEVVVLEDLGAEYLEQLLTISDQTTG 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1753 202 FunFam Ethylene-responsive transcription factor 2 69 130 - -
Acco02g1753 202 PANTHER DNA-BINDING DOMAIN 61 195 IPR044808 GO:0003700|GO:0009873
Acco02g1753 202 Gene3D AP2/ERF domain 69 130 IPR036955 GO:0003700|GO:0006355
Acco02g1753 202 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Acco02g1753 202 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Acco02g1753 202 SMART rav1_2 70 134 IPR001471 GO:0003700|GO:0006355
Acco02g1753 202 CDD AP2 71 130 IPR001471 GO:0003700|GO:0006355
Acco02g1753 202 Pfam AP2 domain 71 120 IPR001471 GO:0003700|GO:0006355
Acco02g1753 202 SUPERFAMILY DNA-binding domain 70 129 IPR016177 GO:0003677
Acco02g1753 202 ProSiteProfiles AP2/ERF domain profile. 70 128 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1753 Acco-ChrAcco02 13609374 13609982 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1753 46 200 AP2-EREBP Transcription Factor Family AT3G23240 54.088 1.39e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco02g1753 AP2 9.1e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1753 02 13609374 13609982 Acco06g0622 06 4017876 4018589 CCT
Acco02g1753 02 13609374 13609982 Acco02g1753 02 13609374 13609982 ECH