Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1746 ATGGGAAGAGCTCCGTGCTGTCAGAAAGTGGGATTGAAGAGAGGTCCTTGGACTGCAGAAGAAGATCAGATTCTGATCAATCATGTCAACAAATATGGCCATAGTAATTGGCGTGCTCTCCCTAGATTAGCTGGGCTTCTGAGGTGTGGAAAAAGCTGCAGACTCCGATGGATCAATTATTTGAAGCCAGACATCAAGCGAGGAAATTTCACCCAAGAAGAAGAAGATACCATCATCAAGCTTCATGAAATGTTGGGAAACAGATGGTCAGAAATAGCAGGAAAGTTACCAGGTCGCACAGACAACGAAATAAAGAATGTATGGCACACACACTTGAAGAAGAGGCTTCCACATAATTACCAACAGAACCATCCCCAAACAAAACGAAAACCAAAACAAAAGGAACCACAACAACAACACACCGCCGTGACGGCGGAGAACAACAGGCCACCACTCTCTCCTTCACATTCAAGTGATGTCTCCACCCTCACCGCCACAAACAGCGATAATAGTGTAATTACTACCAGTAGTACTCCGGCGACTAATAACGTCACTACTAACGACGACGGCACGTCCATGAATATTAATGTTGATGAGTATCCGGCATCGGCGGAGGAGTCCCTGGCATTGGACGATGATTTCTGGTCGGAAGTCCTTTCGGCTGATAACTCCGAGGGGACTACTGATTATATTCCGCCAGCCGGAGGCGGCAGCGATGTGGAGTCAGAATTTCAGTTCCTGTTCTCTCAACTAGACGAGGCACAAGTAGAAGGAGATCATGTGAGTTCGTTAAGTATGGTCGATGATTTTTGGTTTGATGTTTACAATAGAGCCGAGGAATTCACAGAGCTACCTCGGTAA 861 0.4623 MGRAPCCQKVGLKRGPWTAEEDQILINHVNKYGHSNWRALPRLAGLLRCGKSCRLRWINYLKPDIKRGNFTQEEEDTIIKLHEMLGNRWSEIAGKLPGRTDNEIKNVWHTHLKKRLPHNYQQNHPQTKRKPKQKEPQQQHTAVTAENNRPPLSPSHSSDVSTLTATNSDNSVITTSSTPATNNVTTNDDGTSMNINVDEYPASAEESLALDDDFWSEVLSADNSEGTTDYIPPAGGGSDVESEFQFLFSQLDEAQVEGDHVSSLSMVDDFWFDVYNRAEEFTELPR 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1746 286 CDD SANT 69 112 IPR001005 -
Acco02g1746 286 CDD SANT 16 61 IPR001005 -
Acco02g1746 286 MobiDBLite consensus disorder prediction 114 194 - -
Acco02g1746 286 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco02g1746 286 FunFam MYB-related transcription factor 13 66 - -
Acco02g1746 286 FunFam Transcription factor MYB15 68 142 - -
Acco02g1746 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco02g1746 286 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 227 - -
Acco02g1746 286 Gene3D - 68 144 - -
Acco02g1746 286 SMART sant 66 114 IPR001005 -
Acco02g1746 286 SMART sant 13 63 IPR001005 -
Acco02g1746 286 Gene3D - 11 67 - -
Acco02g1746 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco02g1746 286 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Acco02g1746 286 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco02g1746 286 MobiDBLite consensus disorder prediction 137 194 - -
Acco02g1746 286 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Acco02g1746 286 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1746 Acco-ChrAcco02 13515883 13517378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1746 1 285 MYB Transcription Factor Family AT2G31180 49.488 2.76e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g1746 Myb_DNA-binding 7.8e-15 CL0123