Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1732 ATGGGGCAAATCCTTCGTTACCCAAACTGTGACCCATTCTCTCTTCCAGATCCTTCGCCGACGGAGAATATCTCCAGTCCCGTTGAGGTTCGAAACTCGTCCGTGGCCTCAAGGATTCTGCAATTAAAGAAATCGACGAAACTGGCTGCTTCCCAGAATCAAGTAATTATGGAATTGAAAAAAAGCAGAATGTCTGGGAAATCCAAAAATGAAGAAATCCCTTCAACTCCCCCTGGTTTTAGATCCCTTAGTTCTTTCACACTACAAAAGGTTGCAACGACTGATAAATCTGAATGTGATCCAATTTGCACAGAGAGTATATTGAAGCTAGATGACACTGCTGCATTTAAGGAAATTCTTAGGCATCGTCCATGGATACTTTTTGATCAAAGTGACCATGACCTTGAGAAATCCGACACAGAGCAGTTTCCTCAGGGTTTTTCTTCAAATGCTTGTCGTCCAAAAGGGGTTACCCTCGGTTGTCCAGACTGTAGTGATTGCCTAAAGGTAACCACAAGGTGGCGCCCTGAGGATGCAAGAAGAGATGTCCTTGATGAAGCTCAAATTTTCCACCCAACAGAAGAGGAATTCAAAGACATGCATGAATATATTGCAAGCATACGTTCCAAAGCAGAGCCTTGCGGAATTTGTCGTATTGTTCCCCCTCCTACCTGGCAACCACAATGTCTTCTCAAGGAAAAAGACATATGGGAAAACTCCAAATTTGTTACTCAGATTCAACGGATTGATGGACTTCAAGTTCAGTGCCAACAAGAAGTTATGGACAACTCTTCCAAAAATTCAGAGACCAAGACCAGAAGAGGTCTAAGAGTAGCTTTGGACTCTCAACCTGGTAATGAAAATCCACATGATGTTGAAGACTCTGAGTCTAAACCTGGCCCTACCTTCAGTCTCCGTGCATTTAAGAAATTTGCTGATGATTTCAAAGCCAAGTACTTTGACTATGACAATAGTGTTGTGAGTTCTGATGAAAAGTGGGAGCAATCTGTGGAACATATTGAGGGTGAGTATGGACGGATTATCCAAAATCCAACTCATGAAATTGAGGTGCTTGTTGGTAACAACTTGGGGGCTGGAGTTTTAAGCAGTGGATTTCCAATGATGTCTGATCCTCTGGAGTCACTCAAATATCCTGAATGTATGAGATCTGGATGGAACTTAAATAACATGTGTATGCAATCTGGTTCTCTTCTTTCACTTGAAAGCTCTGAGGTTTCTAGCAAATTTACCCCTCGGGTTCATGTTGGAATGTGTTTTTCTTCATTCAATTGGGAAGTAAAAGAGCACCACTTGTACTCATTGTGTTACATGCATGTGGGTGAGCCTAGAGTTTGGTATACCATTCCAGGAAGGTTTGCTGCTGACTTTGAAACAGTGAGGAAGGAGCATCTCCCGGTTTTGTTCGCAAAGCAGCCTGACTCACATGACAATTTGTTATCCTCCACCATATTGAAGTCAGAGGGTATACCAGTATATCGCTGTGTTCAGTATCCCCGGGAGTTTGTTCTTGTCTTCCCAGGAGCATACCATTCTGGATTTGATTGTGGTTTCAATTGTTCTGAATCAGTCAGTTTTGCCCCTCTTGATTGGCTGCTTCATGGACAGAAAGTTGTAGAGTTATATTGTGAACAAAGGAGAAAGACTTCAATCTCGTACGATAAGCTGTTACTTGGGGCAGCAAGGAAAGCAGTTACGGCACTATTTAAGATTGAATTCTCTAGGGAAGGAAACCCAGATTATTTAAAATGGAAAGATGCATGTGGAAAGAATGGGAAATTAACAAAAGCTTTTGATTTACGGAGAAAGATTGAAAGTTCAAAGAGGGAATTTCTTTGCCCTTCTCTGAAATCTCAGAGAATGGAAAAAGATTTTGATGCCACTTGCAAAAGAGAATGTTGCATATGTCTACGCGACTTACACTTATCTGCCGTAGGTTGTCCATGTTCAACCGACAAATTTGCATGTCTTAATCATGCAAAGCAGCTCTGTCGTTGCCCTTGGAGTGACAGATTTATCATCTCCCGATATGAAATGACTGAGTTGGATACCCTCCAGCTTGCTTTGGAGGGAAAAGCAAGTGCTATCCACAGATGGGCCAAGGCCGATTGTGGATTAACTGTGGTCTCCCTTGCCTCCAAAAGAAACGTGGGTGGTTTGCTGTCTAGTTCAAGCGCAAGAGAAGCCTTTTTGAATTCACTGAAACGGAGAAGAGAAGGATTCGAATCTGAAGGTGCGAGCCCTGATGGCATCTCTCCTAGCATTGAGGCAAAGTCGAAGGCAAAGAAACAGAAAACGGCAGGCCACCGATCTACAGCAAGACATGGGATCGATTCTGCTACGCCCATCAAACCTAGTCCTAAGGCACGCAATGTTCAGTCTTCAACTCCAAATTTGGCTAAAAATGACCCAAAAGTCGCCAAGGATTTTCTAGGTCTTAGCTTAACGTCAGGTTATATGGCACTGCTGCCTGAGATCAGGGCACTAGATGTTTCTCCAGATAGTCCATCTTCATCATCAGAATCCGATGACCACGACGACGCTTAA 2565 0.4304 MGQILRYPNCDPFSLPDPSPTENISSPVEVRNSSVASRILQLKKSTKLAASQNQVIMELKKSRMSGKSKNEEIPSTPPGFRSLSSFTLQKVATTDKSECDPICTESILKLDDTAAFKEILRHRPWILFDQSDHDLEKSDTEQFPQGFSSNACRPKGVTLGCPDCSDCLKVTTRWRPEDARRDVLDEAQIFHPTEEEFKDMHEYIASIRSKAEPCGICRIVPPPTWQPQCLLKEKDIWENSKFVTQIQRIDGLQVQCQQEVMDNSSKNSETKTRRGLRVALDSQPGNENPHDVEDSESKPGPTFSLRAFKKFADDFKAKYFDYDNSVVSSDEKWEQSVEHIEGEYGRIIQNPTHEIEVLVGNNLGAGVLSSGFPMMSDPLESLKYPECMRSGWNLNNMCMQSGSLLSLESSEVSSKFTPRVHVGMCFSSFNWEVKEHHLYSLCYMHVGEPRVWYTIPGRFAADFETVRKEHLPVLFAKQPDSHDNLLSSTILKSEGIPVYRCVQYPREFVLVFPGAYHSGFDCGFNCSESVSFAPLDWLLHGQKVVELYCEQRRKTSISYDKLLLGAARKAVTALFKIEFSREGNPDYLKWKDACGKNGKLTKAFDLRRKIESSKREFLCPSLKSQRMEKDFDATCKRECCICLRDLHLSAVGCPCSTDKFACLNHAKQLCRCPWSDRFIISRYEMTELDTLQLALEGKASAIHRWAKADCGLTVVSLASKRNVGGLLSSSSAREAFLNSLKRRREGFESEGASPDGISPSIEAKSKAKKQKTAGHRSTARHGIDSATPIKPSPKARNVQSSTPNLAKNDPKVAKDFLGLSLTSGYMALLPEIRALDVSPDSPSSSSESDDHDDA 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1732 854 ProSiteProfiles JmjN domain profile. 187 228 IPR003349 -
Acco02g1732 854 Pfam C5HC2 zinc finger 639 691 IPR004198 -
Acco02g1732 854 MobiDBLite consensus disorder prediction 792 807 - -
Acco02g1732 854 MobiDBLite consensus disorder prediction 260 300 - -
Acco02g1732 854 ProSiteProfiles JmjC domain profile. 386 549 IPR003347 -
Acco02g1732 854 SMART cupin_9 389 549 IPR003347 -
Acco02g1732 854 Gene3D Cupin 172 533 - -
Acco02g1732 854 SUPERFAMILY Clavaminate synthase-like 383 570 - -
Acco02g1732 854 MobiDBLite consensus disorder prediction 835 854 - -
Acco02g1732 854 MobiDBLite consensus disorder prediction 747 812 - -
Acco02g1732 854 Pfam jmjN domain 189 221 IPR003349 -
Acco02g1732 854 PANTHER LYSINE-SPECIFIC DEMETHYLASE 181 777 - -
Acco02g1732 854 SMART JmjN_1 186 227 IPR003349 -
Acco02g1732 854 Pfam JmjC domain, hydroxylase 420 532 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1732 Acco-ChrAcco02 13399122 13405450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1732 63 714 JUMONJI Transcription Factor Family AT1G08620 45.058 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Acco02g1732 JmjC 2.3e-29 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1732 02 13399122 13405450 Acco02g1732 02 13399122 13405450 ECH