Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1731 ATGGGTCTTAGAGATATTGGAGCTTCACTACCACCTGGGTTTCGGTTTTATCCGAGTGATGAAGAATTGGTGTGTCATTATCTGTACAAGAAGATCTCTAACGAGGAAGCTCTCAAGGGTACTTTGGTCGAAATCGACTTGCACACATGCGAGCCCTGGCAGCTTCCTGAGGTGGCTAAGCTCAACGCGACTGAGTGGTACTTCTTCAGCTTCCGTGACCGCAAATACGCGACGGGGTTCCGGACCAATAGGGCGACGACATCTGGATATTGGAAAGCCACAGGGAAGGATCGGACCGTGGTGAATCCCATCACGAGAGAGGTTGTAGGGATGAGGAAGACGCTGGTTTTCTACAAGAACAGAGCTCCCAATGGTATCAAAACAGGTTGGATCATGCATGAGTTTCGCTTGGAGACCCCACATATGCCCCCTAAGGAAGACTGGGTTTTGTGTAGAGTATTTCACAAAAGCAAATCATCAGATGATAACAGCAGCAGCAGACTCATGTTGGACTCTATTTCATCTCCTTCCCTAACTTTGGCTTCTTCATCTTCTCCGACGACCAACCACCATACCTACCCTCTCCTTGCCTACAATAACCAACTTTCTTCTTCATCCTCAATCCCTACCTTCATTAACCACGATCACACCCAACCCAATCATCATTCTAATAATGCCCTCGTCAACTTCCTTCAATTTTCTGGGGAAACAAACACCGCCGCCACCAGCACGGTCACTCATCAGGACCAGATTAGCCCCGGAGGAGGAGGTGACGGTGGCGATCACGGTGGTTATGGCTTCTTCAGTTGGGACATGGGCCTCGAAGAAAACGCCAGTTTTCAGAATGGCCTCGACGCTATGAGATCATCCTTCGAGGTTGATAATAGTAGCATGGTCTTGTTATGA 906 0.4868 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKISNEEALKGTLVEIDLHTCEPWQLPEVAKLNATEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVNPITREVVGMRKTLVFYKNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKSSDDNSSSRLMLDSISSPSLTLASSSSPTTNHHTYPLLAYNNQLSSSSSIPTFINHDHTQPNHHSNNALVNFLQFSGETNTAATSTVTHQDQISPGGGGDGGDHGGYGFFSWDMGLEENASFQNGLDAMRSSFEVDNSSMVLL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1731 301 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Acco02g1731 301 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Acco02g1731 301 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 217 - -
Acco02g1731 301 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Acco02g1731 301 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1731 Acco-ChrAcco02 13383704 13387613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1731 6 186 NAC Transcription Factor Family AT1G56010 52.910 2.30e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco02g1731 NAM 2.2e-37 No_clan