Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1725 ATGAAAGTGGGATTTGAGGTGATTCATGGCGATCTCAACATGATCAGACCAGTACATATGTATGAATCTTGGGACTACCCGAATATTAATGTTGGGTTGTCTTCTTCAGCTCCAACATCATCGTCAATAGTCCCATTTTCAAAGCCAACACTGCCCATTATTGACACCAACATCACCACCACCACCCACAATACTGTAAACTTGGCAACAAACGAGCTTTCAGATTGGGTGGAGCATTTTACCAAACACCTTGTGGACGACTTACCAGCTGCTTCTGAAACCACATCTGATCATAATAATCATTTTCTTCCTAATTACCAAATAAGGTCTTCTTCTCATCCTCCTCCTCATCATGACAACCTCGTACCCACACCTGTTCTATACCCTAGAAAAGTTCCCTTCAACGACCTGCAAATTCAAATTCAAACCCAAACAAACCCACTAGATCATCTTCATCACGACGACCAAAACAATGATGGGTTACACCTTTTAACACTTCTAATGGAGTGTGCAGTGGCAATCTCAGTGGACAACCTCAATGAAGCACACAGGATGTTACTTGAGCTAACCCAAGTTGTCTCACCATACAAGCCATCTTGTGCAGAGCGAATTGTGGCCTACTTCGCTAAAGCCATGGCTAGTAGAGTAATGAACTCATGGCTTGGAGTATTTCCTCCTTTAATTGATCACAGAACCATTCACTCTTCATTCCAAGTCTTCAACAACATTTCACCTTTCATAAAATTCGCTCATTTCACTTCAAATCAAGCCATTCTAGAAGCAGTACTTTACTGTGACAATATCCATATCATAGACTTAGACATTATGCAGGGTCTTCAATGGCCAGCCTTCTTCCACATCCTCGCCACACGAGTCGAGGGTCGACCACGAGTTCGAATGACAGGTATGGGAGCTTCCATGGAACTCCTCGTTGAGACAGGCAAACAACTAACGAATTTCGCTAAAAGGCTGGGTATGTCGTTCCATTTCCAACCAATCGCGAGGAAGTTTGGGGAAATCGAGGATGTCGCCTCGGTGATGCAAGTAAGACCCGGCGAGACGCTCGCCGTTCACTGGCTGCAACACTCGCTGTACGACGCGACGGGACCGGACTGGAAAACGCTGAGACTCGTGGAAGAATTAGAGCCAAGAATCATAACCTTGGTGGAACAAGATGTGTCAAACGGCGGGTCGTTCTTGGATCGTTTTGTGGGGTCTTTACATTATTACTCTACCGTGTTTGATTCTCTTGGAGCTTATATGGCCAGTGAGGATCTTAACAGGCACAAGGTTGAGCATGAGCTTTTGGCTAAGGAGATAAATAATATCTTGGCCATCGGAGGACCGGCGAGAAGTGGAGAAGACAAGTTTAGACAGTGGAGAAATGAACTTGCGAGACATTGTTTTGTGCAGATTCCGATAAGCCCTAATTCTATGGCTCAAGCTCAATTGATACTGAACATGTTTTCTCCTTCTCACGGCCATGGCTATACTCTTGCTCATGTTGATGGCACACTCAGGCTTGGATGGAAGAACACTGGCTTGTATACTGCTTCTGCATGGACTTGTTATAATTCCACTCATAAACAATTATAA 1596 0.4442 MKVGFEVIHGDLNMIRPVHMYESWDYPNINVGLSSSAPTSSSIVPFSKPTLPIIDTNITTTTHNTVNLATNELSDWVEHFTKHLVDDLPAASETTSDHNNHFLPNYQIRSSSHPPPHHDNLVPTPVLYPRKVPFNDLQIQIQTQTNPLDHLHHDDQNNDGLHLLTLLMECAVAISVDNLNEAHRMLLELTQVVSPYKPSCAERIVAYFAKAMASRVMNSWLGVFPPLIDHRTIHSSFQVFNNISPFIKFAHFTSNQAILEAVLYCDNIHIIDLDIMQGLQWPAFFHILATRVEGRPRVRMTGMGASMELLVETGKQLTNFAKRLGMSFHFQPIARKFGEIEDVASVMQVRPGETLAVHWLQHSLYDATGPDWKTLRLVEELEPRIITLVEQDVSNGGSFLDRFVGSLHYYSTVFDSLGAYMASEDLNRHKVEHELLAKEINNILAIGGPARSGEDKFRQWRNELARHCFVQIPISPNSMAQAQLILNMFSPSHGHGYTLAHVDGTLRLGWKNTGLYTASAWTCYNSTHKQL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1725 531 ProSiteProfiles GRAS family profile. 154 522 IPR005202 -
Acco02g1725 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 122 518 IPR005202 -
Acco02g1725 531 MobiDBLite consensus disorder prediction 91 115 - -
Acco02g1725 531 MobiDBLite consensus disorder prediction 92 114 - -
Acco02g1725 531 Pfam GRAS domain family 164 522 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1725 Acco-ChrAcco02 13310130 13311909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1725 149 522 GRAS Transcription Factor Family AT3G54220 53.018 1.28e-131 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco02g1725 GRAS 3.6e-99 CL0063