Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1724 ATGAGGGGTATTGGTGATCATTTCACCATGGACCATTTGGTTGGTGGGAAGTTTAAACTGGGAAGGAAAATTGGGAGTGGTTCTTTTGGGGAGCTTTATTTAGGCGTAAATGTGCAAAATGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGACTAGGCATCCCCAACTTTTCTACGAGTCAAAACTGTATATGCTTCTTCAGGGAGGAATGGGGATTCCCCACATAAAATGGTTTGGAGTTGAGGGAGACTATAATGTCATGGTTATTGACCTTCTTGGACCAAGTTTGGAAGATTTGTTCAACTATTGCAACCGGAAATTCACGTTGAAGACTGTATTAATGCTTGCTGATCAATTAATTAATAGAGTTGAATATATGCATACAAAAGGTTTTCTTCATCGTGATTTAAAGCCTGACAATTTTCTCATGGGCCTAGGACGTAAAGCAAACCAGGTGTACATAATTGACTATGGCCTTGCGAAGAAGTATAGGGATCTTCAGACTCATAAGCACATACCATACAGGGAAAACAAGAACCTCACTGGCACAGCTCGCTATGCAAGTGTGAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTTCTCATGTACTTCTTAAAAGGAAGTCTTCCTTGGCAGGGACTCAAGGCTGGCACAAAAAAGCAAAAATATGATAAGATCAGTGAGAAGAAGGCATCAACCCCAATAGAGGTGCTCTGTAAATCATACCCATCTGAGTTTCTATCTTTCTTCCACTACTGCCGGTCATTGCGTTTTGAGGACAAGCCTGATTATTCATATTTAAAGAGACTTTTTCGAGACTTGTTTATTCGAGAAGGTTATCAGTTTGACTATGTTTTCGATTGGACTATATTGAAGTATCCACAGATTGGTTCTAGCTCTAGAGGACGGCATGCCAGTGGCAAAGCAGCTATGAATGTAGGACCATCTGTACAAAAGCCAGAAAAGATGTCAGTTGGGAAAGATCCTCGAGAGAAATTCTCTGGCCCTGTTGAAGCATTCTCCAGGAGAAACCCCACAAATTCTAGTCCTCGGGCTGATCAAGCTAAGCAAAGGATGTTTGAGGATGTACAGCAACATAAGCATATGCGTGAACAAGAGAAGGTAATCAGCAGTTCAAGGAAAGCCCTCATCTCATCATACAAGCCAAGTTCGTCTGCTGACCAGAGCGATACTCGTACTGGCCGGCTGACTACAAGCAGTAGCCGCCCTTCTACCACACGTGTGTTGTACGAGAGCAAACCTCCAAGTTTCACACGCAATACATCTACTCGAGCCAATCGTGATGATCCTCTTAGGAGCTTTGAGCTTCTCTCTGTCAGGAAGTAA 1380 0.429 MRGIGDHFTMDHLVGGKFKLGRKIGSGSFGELYLGVNVQNGEEVAVKLEPVKTRHPQLFYESKLYMLLQGGMGIPHIKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHTKGFLHRDLKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLKGSLPWQGLKAGTKKQKYDKISEKKASTPIEVLCKSYPSEFLSFFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRGRHASGKAAMNVGPSVQKPEKMSVGKDPREKFSGPVEAFSRRNPTNSSPRADQAKQRMFEDVQQHKHMREQEKVISSSRKALISSYKPSSSADQSDTRTGRLTTSSSRPSTTRVLYESKPPSFTRNTSTRANRDDPLRSFELLSVRK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1724 459 FunFam Casein kinase 1-like protein 10 339 - -
Acco02g1724 459 PANTHER CASEIN KINASE-RELATED 16 388 - -
Acco02g1724 459 MobiDBLite consensus disorder prediction 334 348 - -
Acco02g1724 459 MobiDBLite consensus disorder prediction 351 365 - -
Acco02g1724 459 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Acco02g1724 459 Gene3D Transferase(Phosphotransferase) domain 1 4 344 - -
Acco02g1724 459 CDD STKc_CK1_delta_epsilon 17 291 - -
Acco02g1724 459 MobiDBLite consensus disorder prediction 309 459 - -
Acco02g1724 459 MobiDBLite consensus disorder prediction 366 388 - -
Acco02g1724 459 FunFam Putative Casein kinase I 10 94 - -
Acco02g1724 459 Pfam Protein kinase domain 19 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1724 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Acco02g1724 459 MobiDBLite consensus disorder prediction 443 459 - -
Acco02g1724 459 MobiDBLite consensus disorder prediction 389 442 - -
Acco02g1724 459 SUPERFAMILY Protein kinase-like (PK-like) 13 299 IPR011009 -
Acco02g1724 459 SMART serkin_6 18 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1724 459 ProSiteProfiles Protein kinase domain profile. 18 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1724 Acco-ChrAcco02 13297847 13303877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1724 17 222 MAP Kinase Kinase Kinase AT3G06030 26.389 1.86e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Acco02g1724 Pkinase 9.6e-26 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1724 02 13297847 13303877 Acco02g1724 02 13297847 13303877 ECH