Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1710 ATGAAAAGTAGAATCAGAGAAAGAAGGAAGCGCGATACCAGCAGGAATTTGCGGAGGATAATGAAGTGCCTATGTTCAGGGGAGCAGTTAAGAGGAGAAGACGAAATGGTTCCGTCATCCGAATCTCATGCATCCAAGGATTATTCTGTGAGTGGGGATTCTTGCACAGCTGGACAAGTTGACAAGAAGAAGCCAGACACTGGTAATATAGAAGAAGCTGAATCATCCCTTCGTGAGAGTGGTTACTTGAACTATGAGGAAGCTAGAGCTCTGTTAGGAAGATACGAATTTCAGAAAGGAAACATTGAAGCCGCTTTACATGTTTTTGAAGGAATAGATATAGTTGCCGTGACTCCTAAAATTAAAATTTCCCTTGCCCAAAGGGCAGAACAACCTAAGAGACACAAGAGACATTCCCACAATTATGCAGCACCCCCAATGTCAATACATGCTGTTGGCTTATTGCTGGAATCGGTCCTCCTGAAATCAAAATCATTGCAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTCGAATCTTCATTACCTGAAGGTTTGCCTGAAAACTTTGGTGCCGAATGTAAATTGCTGGAGACTCTGAGCAATGCGGTTGAGTTGCTTCCAGAACTATGGAAACTTGCTGATAGTCCACGTGAAGCTATTGTGTCTTATAGGCGGGCACTCCTTCATCGATGGAATCTTGATGCAGAGACTACAGCAAAGATTCAAAAAGAGTTTGTCATATTTCTTCTATATAGTGGCGGGGAAGCAAGCCCCCCAAATCTCCGTTCCCAAATGGACAGCTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTTCTTTTGATGATTTTGTTAAGAAAAGTCACGTTAAATAGAATTGAGTGGGATCCTTCAATTTTAGATCACCTTTCGTTTGCTCTATCTGTTTCTGGGGATTTGACAACTCTAGCTAATCAATTGAAAGAATTGCTCCCTGGGACTGTCAGCCGAAGAGAAAGGTATTTTACTCTTGCTCTCTGTTATCTTGGAGCTGGAATGGACTTGATGGCTCTGGATCTTCTCAGAAAAGTGTTGAGTAGTAAAGAGGACCCTAAACATATTCCAGCTTTGTTAATGGCATCTAAAATATGTTCTAGTAACCATAGTCTTGCTGAAGAAGGGGTAAGTTTTGCTTCCAGAGTGCTTGAGAGCTCGGATGATAGATGTGATAAGTTAGAAAGTGTTGCCAATTGCTTACTTGGTGTTTCACATTCAGCAAATACAAAATTAGCCATTGCTGATTCTGAGAGATTTGAGAGGCAATCTGAGGCACTTCGTGCTCTGGAAACTGCTGGAAAAATGACTCAAATGAGAGACCACAACGTATTGTACCATCTTAGTTTAGAATATGCGGAACAGAGGAAGTTGGATTCTGCATTTCATTGTGCAAAATACCTTCTAAAACTGGAAGCTGGGTCTAATGTCAAAGGGTGGCTGTTGTTAGCTCGAATATTATCGGCTCAAAAACGGTTTTCAGATGCTGAATCTGTTATCAACGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGGGATTCATTGCGAACAAAAGCTAAACTTCAAATTGCGCAGGGCCAGTTAAGGAGTGCGATTGAGACATATACTCAACTTCTTGCTGTTTTTCAAGTTCAAAAGAAAACATTTGGTTCTGGGAAGAAGCTATATAAGGAGAACAGAGATCATTCGAGGAACCTGGAAGTCGAAGTATGGCATGATCTTGCCTGTGTATATATAAGCCTGTCACAGTGGCATGATGCTGAGATGTGTCTTTCTAAGTCTAAGGCCATCAAACTTTACTCCGCTTCTAGATGTCATATAGCAGGAACACTGCACGAAGCAAAGGGTCTTTACAAAGAGGCTTTAAAGGCTTTTGGTGATGCTTTGAACATCGATCCCAATTATGTGCCAAGCTTGATTTCCAGTGCCGTGGTTCTGAGACGGTGCAGTATTAGTAAGGAAGCAAATGCTGTAGTGAGAAGCTTTTTGATGGATGCACTGCGCCATGATAGATTGAATGCTGGTGCTTGGTATAATCTTGGACTTGTTCACAGGGATGAGGGTACAGTCCAGTCATTAACGGAAGCTGCAGAGTGTTTCGAGGCTGCTCATTTTCTTGAAGAAACTTCGCCTGTTGAACCTTTCAGATGA 2217 0.4208 MKSRIRERRKRDTSRNLRRIMKCLCSGEQLRGEDEMVPSSESHASKDYSVSGDSCTAGQVDKKKPDTGNIEEAESSLRESGYLNYEEARALLGRYEFQKGNIEAALHVFEGIDIVAVTPKIKISLAQRAEQPKRHKRHSHNYAAPPMSIHAVGLLLESVLLKSKSLQALGRFKEAAQSCKVILDIVESSLPEGLPENFGAECKLLETLSNAVELLPELWKLADSPREAIVSYRRALLHRWNLDAETTAKIQKEFVIFLLYSGGEASPPNLRSQMDSSFVPRNNIEEAILLLMILLRKVTLNRIEWDPSILDHLSFALSVSGDLTTLANQLKELLPGTVSRRERYFTLALCYLGAGMDLMALDLLRKVLSSKEDPKHIPALLMASKICSSNHSLAEEGVSFASRVLESSDDRCDKLESVANCLLGVSHSANTKLAIADSERFERQSEALRALETAGKMTQMRDHNVLYHLSLEYAEQRKLDSAFHCAKYLLKLEAGSNVKGWLLLARILSAQKRFSDAESVINAALDQTGKWDQGDSLRTKAKLQIAQGQLRSAIETYTQLLAVFQVQKKTFGSGKKLYKENRDHSRNLEVEVWHDLACVYISLSQWHDAEMCLSKSKAIKLYSASRCHIAGTLHEAKGLYKEALKAFGDALNIDPNYVPSLISSAVVLRRCSISKEANAVVRSFLMDALRHDRLNAGAWYNLGLVHRDEGTVQSLTEAAECFEAAHFLEETSPVEPFR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1710 738 SUPERFAMILY TPR-like 536 726 IPR011990 GO:0005515
Acco02g1710 738 Gene3D Tetratricopeptide repeat domain 63 570 IPR011990 GO:0005515
Acco02g1710 738 SUPERFAMILY TPR-like 446 560 IPR011990 GO:0005515
Acco02g1710 738 Gene3D Tetratricopeptide repeat domain 571 734 IPR011990 GO:0005515
Acco02g1710 738 ProSiteProfiles TPR repeat profile. 624 657 IPR019734 GO:0005515
Acco02g1710 738 Pfam Tetratricopeptide repeat 471 527 - -
Acco02g1710 738 PANTHER PROTEIN NPG1 21 738 IPR043376 -
Acco02g1710 738 MobiDBLite consensus disorder prediction 42 56 - -
Acco02g1710 738 Pfam Tetratricopeptide repeat 626 657 IPR019734 GO:0005515
Acco02g1710 738 SMART tpr_5 590 623 IPR019734 GO:0005515
Acco02g1710 738 SMART tpr_5 534 567 IPR019734 GO:0005515
Acco02g1710 738 SMART tpr_5 696 732 IPR019734 GO:0005515
Acco02g1710 738 SMART tpr_5 341 374 IPR019734 GO:0005515
Acco02g1710 738 SMART tpr_5 463 496 IPR019734 GO:0005515
Acco02g1710 738 SMART tpr_5 624 657 IPR019734 GO:0005515
Acco02g1710 738 SMART tpr_5 498 531 IPR019734 GO:0005515
Acco02g1710 738 MobiDBLite consensus disorder prediction 31 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1710 Acco-ChrAcco02 13144573 13149248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1710 11 738 Calmodulin-binding Proteins AT4G28600 57.046 0.0 783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0650 06 4188125 4191486 Acco02g1710 02 13144573 13149248 CCT
Acco02g1710 02 13144573 13149248 Acco02g1710 02 13144573 13149248 ECH