Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1707 ATGTATTTTGTACCATTGGGCATGAATGATATATTATTTAAAAATATTTTCTGGATCAGTAGTGGCTCCTTCGAACATATGAAGTTTAGTTTTGTTCTTAAATGCTGTTGGGTAACCTTTTTTTGGCCAAAATGTTTTGCCCTTACTAACGTCTATAGATTATTAGATATTGCAATTGTCGAGCATGATGTAACTAGAAACTTTGAGGCGAGTCTGGGTTCTCTACAAGATCAAGTATCTGCGATGGGTTGTTTTCTTGCATGCTTTGGTTCATCTAAAGAAGCCAAACGCAGGAAACAGAGGCGCAAGATTCCGCCTCGTGACTGTGGCCAACGGTATACAACTAGCAAGGCAGAGCAGTCTTGTGTCAATTCAGTTCAGGATCTCTCTAAACCCGTCACAATCAGCATCGCATCAAAAGTCCAGGAAATCAAGCCTGAGGAGCAGTTAAGCTTGATTACGAGGAAGAAAGTAACATTTGATTCTAATGTGAAAACCTACGAGCCAGTTTTGCCAGATGAAGTTACGGAGCTTCACTTGGAGAAGTGTGAACAAGGTGGGAATAAGGAAGAAGATTTGATGAAATTAAGCCAATCCAAGTCCTCCTCAGACGCTAGTTCTGTGACTTCTACAGGATCTTATCCTCCGAATAGCAGATACCAAAATTGCAGAGAAAGCGATGATGAAGATGAAGAAATGGATTATAGGGTTAGTGACCTTAGTGATGAGGACAGTGACATGGGAGAAGAATTCGGCGAGGACTTCGACGATGATATTGAGTATTCAAGGGCGAGAACTTGTGCTGCTCAGAAGGCTGCTGAGGAAATGAAGGGTCCAATCCCAACTGGTTCTTTGCGTGAGAGTGAAGCGAAGCCAATTGTGATGAACCCAAATGCTCGAGATAGAAGTGTTTATGTTCATCCTGTGCTGAACCCAGTAGAAAATCTCACCCAGTGGAAAGCTGTTAAAGCCAAACGAACACCGCCACCAATCCGTCAGAAAGAGAATTCTAATTCCAATAAAGAGTATCAGATCCCTTTTAGTTCAGAACCGAGCTTCAAGGAACGGTCTCAAGGGAACTACTCTTCAAAGAAATCGAAGCAGGAAATTGCAGTTGATGCTAGCCTTTCAAATTGGTTGGGTTCATCCGAAACTACACCAGTTAACAAGCCTAGTTCAGTTGCTTTGTATTCTGGCACGCCAGACAGGAGCACTTCACAAGGTTCTTCACAAGGTTCAGTAATAAGCCATGAAGATAGACCCATTTTGGGTGCATTAACGGTGGAGGAGATTAAGCAGTTTTCTGCTTCCAATTCACCAAGGAAGTCACCAAGTAAGAGTCCGGATGAGATGCCAATTATAGGGACTGTAGGGACATATTGGAGTCACTCAGGCTCTCTTAAGGATTCTGGCTCTGGAGCCTTCTTTAAAGGAATTCCTAACACCACAAGCAAGTACAGAGAGGATAAGAAGGTGAATTGGCATTCAACCCCATTTGAGACAAGGTTAGAGAGAGCTTTAAATAGAGGCGCTGCTGAAGTTGCTTGCACTCATCTTGTCATAGAGAAACCATATGTTGGGGTAGGCATGACAACCTTTCCAAAAGCTCCTCCTTTCCTCTTTCTTCTACTCTTACTACTCTTTCTTCCATTGCAGATCATTGCTTCTCCTACAACTGAAGCAGAAGCTCTTATCAGATGGAAAACAAGTCTCTCTCTTCCTCATCCTGATTTTCTCAATTCATGGTCCCTCACCAACCTCAACAATCTCTGCAGTTGGGAAGCCATTTTTTGTGATGATACTAACACAACAATCTCAGAGATAGATCTCTCTAATGCAAACCTCACCGGCACATTTGAAGAGTTGGATTTCGCATCTCTTCCCAATCTCTCCCTATTGAACCTCAATAGCAACAGTTTCAGTGGGTCAATTCCTTCTGCAATTGGTAAGCTCTCCAAGATCAGTTTCTTGGACCTGGGATTAAACTCCTTCGAAGGAACACTTCCTTCTGAACTGGGTCAGCTAAAGGAGCTTCAATATCTTAGTGTTTACTTCAACTATCTCAACGTTACTATTCCTTATCAGATCACAGATCTTCCGAAGGTATGGTACCTAGACCTTGGTATGAACTTCTTTATATCTCCTGCTGATTGGTCATATTATTCAGGAATGCCATCTTTAACCAACCTCAGTTTGGCGTTCAATTCTTTTACTTCCGAATTCCCAAGTTTCATACTGGAATGTCAGAACTTGACATACCTTGACATCTCTCAAAATGAAATGTCTGGCCCAATACCAAAATCCATGTATACTAGTCTGGGTAAACTTGAATATCTCAATCTTACCAATTGTGGGCTAGAAGGACCTCTGTCATCAGATTTGTTCAAGCTTTCTAATCTAAAAGAACTTCGCTTGGGGAGTAACAAGTTTTCTGGTCCTATTCCCACAGAGTTAGGATTAATGTCTGCACTTCAATGTCTTGAACTGAATAAAAATTCAATCAGAGGGGAAATTCCTGCCTCACTAGGAAATCTCAGTGATCTAGTGACGCTTGATCTCCGCGAGAATTTTTTGAATTCTACTATCCCTTCTGAGCTTGGCTTCTGCACTAATCTAACCTTCCTGAGTTTGGCGGTGAATAATTTGACTGGTCCTTTGCCTTTGTCACTATCTAAACTGACCAAAATAGCAGAATTGGGGTTATCAGGAAATTCCTTTTCCGGCCAGCTTTCTTCCTTGTTGGTTTCCAATTGGACTGACTTGGTCTCTTTGCAACTTCAACACAATAAATTCACAGGAAAAATCCCGCCAAAGATTGGCTTGTTGACAAAAATCAAATACTTGTATCTGTATAAGAACGAGTTCTTTGGTTCCATTCCTCATGAGATTGGAAACTTGAAAGTATTGATAGAACTAGACCTTTCAGGAAACCAATTCTCAGGGTCTATTCCGTCAACTATTTGGACTCTTTCAAACATTACCACCATAAACCTTTATTCCAATAAACTCTCTGGAAACATTCCCATGGATATTGGAAACTTGACCTCTCTACAAGTTTTCGATGTCAACACTAATTATTTGCAGGGAGAGTTACCAGAGACTTTTTCTCAGCTAACTGGGTTACAGTTCTTCTCTGTGTACACCAATAATTTTTCTGGCAACATTCCTAAGAATTTTGGGAAGTATAGTCCTTCTTTGAGTTATGTCAGCTTCTCAAACAATAGCTTCTCTGGAGAGCTGCCAAGTGATTTGTGCAGTGGTTTCAAAATAACACATTTGACTCTGAATAACAACACATTTTCTGGGCCAGTACCAAACTGCTTGAGAAATTGTTCGGAACTAGTTAGAGTTCGTCTTGATGAAAATCAATTCACAGGAAACATGACAGAAGCATTTGGAGTTCATCCCAGTCTTGTCTTTGTCTCGTTGGGTGGCAATCAGTTTTTTGGCGAGCTCTCCCCTTTGTGGGGTGAATGCTTAAACTTAAGCAGGATAGAAATTGACAGAAATAAACTTTCGGGTAAAATTCCACCTGAACTAGGTAAGTTGAGCCGATTGCAGTATTTGAGCCTATCCTCCAATGATTTGACTGGCCATATCGCACCCGAAATGGGCAATCTTAGCCAGCTTTACATGTTCAAATTGAGCAACAACCATTTGACAGGGCAGATCCCAGAGAGTATTGCCAGATTAGCTCATCTTAATTATCTTGATTTATCAGATAACCACTTCACTGGAAGCATACCAAAACAGCTTGGTAACCATGATGGCCTAAATAGTTTGAATTTAAGTCACAACAATCTAACTGGTGAGATACCATCTGAGCTTGGCAACCTCTTCTCGCTCCAATACCTCTTGGATCTCAGTAGCAACTCTCTTTCTGGGCCAATTCCTCAAAACCTAGAGAAGCTCAATTCTTTGATGATACTCAATCTGTCACACAACCATCTTTCAGGGACAATCCCAGAAACATTTCCAAGTATGCTGAGTCTCCAATCTATTGATTTTTCTTATAATAACTTGACGGGTCCAATCCCAACTGAGGGTATTTTCAAAACAACACCTGCTAAAGCTTATGCCGGAAACTCGTTGTGTGGGGAAGGAAATGGATTAACTGCTTGCTCTATAGCATCTACCACAGACAAGTCCAAAAGGCTAAACATAAAGGTTCTCCTTGGGAATATCATACCTGTTTGTGGGCTATTAATCACAGGGATGATCGGATTCCTAATATTCCGCAGGCAGGCCAAAATCCTTGACGAAGAGACCAAAGATAGTGAGAAGAATGAAAACCCCTTATCTACAACATGGGGAAGAGATGGAAAATTCACATTTGCTGAAGTTGTCAGGGCAACCGAAGATTTCAATGAGAGGTACTACATAGGAGAAGGAGGATTCGGAAGAGTTTACAGAGCAGTATTACCAACAGGTCTAGTTATAGCAGTTAAAAGGCTCAATATCTCAGATTCCAGTGATATTCCAGCAGTGAACCGCCAAAGTTTTGAGAATGAGATAAGAACACTAACCCAAGTGAGGCACCGCAATATCATCAAGTTTTACGGGTTCTGTTCCAGCCAGGGACGCATGTACCTGGTGTATGAATATATGAACAGAGGCAGTCTGGGCAAAGTATTATATGGGGAAGAAGGTAAATCAGAACTAGACTGGCTTATAAGGATAAGAATTGTACAGGGAATAGCACATTCAATTGCCTACCTTCACAGTGATTGTTCCCCACCAATAGTTCACCGAGATGTGACGATCAACAACATACTATTGGATTCAGATTTTGAACCCCACCTTGCAGATTTTGGCACTGCAAAGCTATTAAGCTACAATTCAACAACCTGGACCTCGATTGCTGGATCCTACGGGTACATGGCTCCAGAGTTAGCACAAACCATGAGGGTGACGGAGAAATGCGATGTGTACAGCTTTGGAGTGGTGGCATTAGAGATAGTGATGGGGAAGCACCCAGGAGATCTCCTAACTTCGATGTCTTCGATGCAGCATTTATCGTCAATGGAGGAGGATTCAGAGGCGCTTCTGAAGGATGTGCTGGACCAGAGGCTACCACCCCCAAGAGGGCAATTAAGAGAAGCAATAGCATTCACAGTGAGTGTAGGGATGGCCTGCACGCGTAAGAATCCAGAGTCGAGACCAACGATGCGTTCTGTGGCAAAAGAAATTTCGGTTAAGACTCAAACTTGCCTTGCAGAGCCCCCCAGGGCAATGAGGAAGTAG 5244 0.4203 MYFVPLGMNDILFKNIFWISSGSFEHMKFSFVLKCCWVTFFWPKCFALTNVYRLLDIAIVEHDVTRNFEASLGSLQDQVSAMGCFLACFGSSKEAKRRKQRRKIPPRDCGQRYTTSKAEQSCVNSVQDLSKPVTISIASKVQEIKPEEQLSLITRKKVTFDSNVKTYEPVLPDEVTELHLEKCEQGGNKEEDLMKLSQSKSSSDASSVTSTGSYPPNSRYQNCRESDDEDEEMDYRVSDLSDEDSDMGEEFGEDFDDDIEYSRARTCAAQKAAEEMKGPIPTGSLRESEAKPIVMNPNARDRSVYVHPVLNPVENLTQWKAVKAKRTPPPIRQKENSNSNKEYQIPFSSEPSFKERSQGNYSSKKSKQEIAVDASLSNWLGSSETTPVNKPSSVALYSGTPDRSTSQGSSQGSVISHEDRPILGALTVEEIKQFSASNSPRKSPSKSPDEMPIIGTVGTYWSHSGSLKDSGSGAFFKGIPNTTSKYREDKKVNWHSTPFETRLERALNRGAAEVACTHLVIEKPYVGVGMTTFPKAPPFLFLLLLLLFLPLQIIASPTTEAEALIRWKTSLSLPHPDFLNSWSLTNLNNLCSWEAIFCDDTNTTISEIDLSNANLTGTFEELDFASLPNLSLLNLNSNSFSGSIPSAIGKLSKISFLDLGLNSFEGTLPSELGQLKELQYLSVYFNYLNVTIPYQITDLPKVWYLDLGMNFFISPADWSYYSGMPSLTNLSLAFNSFTSEFPSFILECQNLTYLDISQNEMSGPIPKSMYTSLGKLEYLNLTNCGLEGPLSSDLFKLSNLKELRLGSNKFSGPIPTELGLMSALQCLELNKNSIRGEIPASLGNLSDLVTLDLRENFLNSTIPSELGFCTNLTFLSLAVNNLTGPLPLSLSKLTKIAELGLSGNSFSGQLSSLLVSNWTDLVSLQLQHNKFTGKIPPKIGLLTKIKYLYLYKNEFFGSIPHEIGNLKVLIELDLSGNQFSGSIPSTIWTLSNITTINLYSNKLSGNIPMDIGNLTSLQVFDVNTNYLQGELPETFSQLTGLQFFSVYTNNFSGNIPKNFGKYSPSLSYVSFSNNSFSGELPSDLCSGFKITHLTLNNNTFSGPVPNCLRNCSELVRVRLDENQFTGNMTEAFGVHPSLVFVSLGGNQFFGELSPLWGECLNLSRIEIDRNKLSGKIPPELGKLSRLQYLSLSSNDLTGHIAPEMGNLSQLYMFKLSNNHLTGQIPESIARLAHLNYLDLSDNHFTGSIPKQLGNHDGLNSLNLSHNNLTGEIPSELGNLFSLQYLLDLSSNSLSGPIPQNLEKLNSLMILNLSHNHLSGTIPETFPSMLSLQSIDFSYNNLTGPIPTEGIFKTTPAKAYAGNSLCGEGNGLTACSIASTTDKSKRLNIKVLLGNIIPVCGLLITGMIGFLIFRRQAKILDEETKDSEKNENPLSTTWGRDGKFTFAEVVRATEDFNERYYIGEGGFGRVYRAVLPTGLVIAVKRLNISDSSDIPAVNRQSFENEIRTLTQVRHRNIIKFYGFCSSQGRMYLVYEYMNRGSLGKVLYGEEGKSELDWLIRIRIVQGIAHSIAYLHSDCSPPIVHRDVTINNILLDSDFEPHLADFGTAKLLSYNSTTWTSIAGSYGYMAPELAQTMRVTEKCDVYSFGVVALEIVMGKHPGDLLTSMSSMQHLSSMEEDSEALLKDVLDQRLPPPRGQLREAIAFTVSVGMACTRKNPESRPTMRSVAKEISVKTQTCLAEPPRAMRK 1747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1707 1747 FunFam Leucine-rich repeat receptor protein kinase MSP1 1419 1535 - -
Acco02g1707 1747 Gene3D Ribonuclease Inhibitor 718 913 IPR032675 -
Acco02g1707 1747 Gene3D Ribonuclease Inhibitor 1027 1377 IPR032675 -
Acco02g1707 1747 MobiDBLite consensus disorder prediction 227 257 - -
Acco02g1707 1747 SUPERFAMILY Protein kinase-like (PK-like) 1432 1728 IPR011009 -
Acco02g1707 1747 MobiDBLite consensus disorder prediction 198 221 - -
Acco02g1707 1747 SUPERFAMILY RNI-like 1051 1346 - -
Acco02g1707 1747 FunFam MDIS1-interacting receptor like kinase 2 1536 1736 - -
Acco02g1707 1747 MobiDBLite consensus disorder prediction 331 416 - -
Acco02g1707 1747 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 962 1059 - -
Acco02g1707 1747 Pfam Leucine rich repeat N-terminal domain 559 599 IPR013210 -
Acco02g1707 1747 SUPERFAMILY RNI-like 607 914 - -
Acco02g1707 1747 MobiDBLite consensus disorder prediction 194 291 - -
Acco02g1707 1747 Pfam Leucine rich repeat 725 786 IPR001611 GO:0005515
Acco02g1707 1747 Gene3D Transferase(Phosphotransferase) domain 1 1536 1740 - -
Acco02g1707 1747 ProSiteProfiles Protein kinase domain profile. 1455 1732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1707 1747 FunFam Nuclear pore complex protein NUP107 557 716 - -
Acco02g1707 1747 MobiDBLite consensus disorder prediction 321 417 - -
Acco02g1707 1747 Gene3D Phosphorylase Kinase; domain 1 1416 1535 - -
Acco02g1707 1747 SMART LRR_typ_2 1231 1255 IPR003591 -
Acco02g1707 1747 SMART LRR_typ_2 1304 1327 IPR003591 -
Acco02g1707 1747 SMART LRR_typ_2 1328 1353 IPR003591 -
Acco02g1707 1747 SMART LRR_typ_2 1183 1207 IPR003591 -
Acco02g1707 1747 SMART LRR_typ_2 724 748 IPR003591 -
Acco02g1707 1747 SMART LRR_typ_2 966 990 IPR003591 -
Acco02g1707 1747 SMART LRR_typ_2 627 651 IPR003591 -
Acco02g1707 1747 SMART LRR_typ_2 845 869 IPR003591 -
Acco02g1707 1747 SMART LRR_typ_2 1014 1037 IPR003591 -
Acco02g1707 1747 SMART LRR_typ_2 797 821 IPR003591 -
Acco02g1707 1747 SUPERFAMILY RNI-like 838 1149 - -
Acco02g1707 1747 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1581 1593 IPR008266 GO:0004672|GO:0006468
Acco02g1707 1747 Pfam Protein kinase domain 1459 1728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1707 1747 Gene3D Ribonuclease Inhibitor 557 717 IPR032675 -
Acco02g1707 1747 CDD STKc_IRAK 1461 1730 - -
Acco02g1707 1747 Gene3D Ribonuclease Inhibitor 914 1026 IPR032675 -
Acco02g1707 1747 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 1063 1378 - -
Acco02g1707 1747 ProSitePatterns Protein kinases ATP-binding region signature. 1461 1483 IPR017441 GO:0005524
Acco02g1707 1747 FunFam MDIS1-interacting receptor like kinase 2 722 915 - -
Acco02g1707 1747 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1039 1731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1707 Acco-ChrAcco02 13112212 13120794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1707 772 1629 Receptor kinase-like Gene Family AT4G08850 42.907 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco02g1707 Pkinase 1.4e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1707 02 13112212 13120794 Acco02g1707 02 13112212 13120794 ECH