Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1701 ATGTGGGTTTCTAAACTATTCCTTGATTTTTTCCCTGTGGTTCTGGGTGGTGCATTCAATATTCACGTCTCGGCCGGGACTGAGACACAGATAAAAATGGCACCCAATCCAAGGGTGGCAGCTGCCTATCGTGCAATGACTGTTCTTGGCATCAAGGAAGTACAAGTTAAACCCGTATTGAAGCAACTTCTTAAACTCTATGATAAGAACTGGGAACTTATTGAACAAGAAAACTATAGAGTTCTTGCAGATGCTATATTTGAGCAGGCGGAAAAAGAGTTGCAGGGAAAGAGGCAGAAAAACCAGAACAATGATGAAGGAGAAATGGAGGATGAAGAAGCTCAAATGCGGGATGAATCAGTGCGACCTTTTAAGAGGTTGCGTTTAAGAGGCCAAGAGAATCAGCTGAGTATTGGTGGAACCAGCTCAGCTGCCTCCCCATCTAAAATGCCCAAAGTAGAAGATGATGAATTGCCCCAGCAGCCTCAATACAAGGCAATGTCGCCTCAGTCCAATAGAAATGTTGAAACTGAAGTTCGTCCTGTTCCAGTGCAAGACAGTCTAGTTAACAAGGGAAAGCAACCTTTATCATCTCAAGATGCTCCTGGAGGAAGAAGAGTTGGATCTGAAAGAGCATCTCCATCAGTGCAGCTTAAAGAACCTACAACTGAACGGAGAATTGTGCTGTCACAGAAAAACCAGTTGCTGTATACTCACGAGTTGATCATACCTAAAGATGAGCCTATTGATGAACTTGTAGATTATGATGCTCCTATAGCAACAATTAATCCTGAACTGCCTAGTGGAAGAGACCATCCAATGCAGCATGATGCGACTAGAAAACAAGGCAGGAATGGTCCTTTAATGTCAAAACACAGAGATGTAGGTAGAGGGGATGGTATTTGGGATTCATCAAATGAAGCAAACCATGAGGTTGCGACAAACCAAGAATGTTCTGCCATAGAGATAGCCTCTTCAACTTCTGGAGAGGTAAAACTTACTATGAGCTGCAGTTCAGCTCTTGGGAGATCAGATTTTCGTTTGCCTAGTCGAGATCAACTTTTAAAAATGATGGAGGATAAATGTCTGCAATCATATAATATCACTGACCCAAGTTTTTCTGTCATGAAACTGTTGAGAGATATGTGTGACTGCATGTTGGAATTCAGAACTGACTCAAATGATGACTCACAGGAAGGATCTGAAATGATGACATCAAGTCTAAATGTATTGAAGGAATCTAAGACATGTGATGCTCTGGTTATCAGAGGCAATACAGAAGATTTAGGAATGCAGGCTGACATGTCAAATGGATCAATCAACATTCAGTCTTCTTCTGCACTGGCTGCATCTCACATTTCCATTTCTCCCCTGCTCATGACTGGTATGAATGATGCTGTACTTGTCACAAATAAGGCCAGAAGTGATTTTCCTGAATGTGAAGATGGAAAGGGGCTGGAGGATCCTATACGTCCTCATTCAGGTAGTTTGGTGGCTGTTCAACAGCATGAGCTTACTCCTGATGATCTAAGGTCTCTTCATGGTGCTGACGACCTTTCAAAAGGAGAAGAAAATCTCAGAATTCCATGGGTGAATGAAATAACAAATGATTTCCCTCCACCTTTTCACTATCTGCACCACAGCATTGCTTTCAGAGATGCTTATGTTAACTGGTGTCTTTCAAAGATCAAGTGTGAGGATTACTGTTCAACTTGTTTGGGCGATTGTCTTCTGTCCCCGACTCCTTGTGTTTGTGCAAATAAAATTGAGGGTGGGTATGCATACACATCTGAAGGGCGACTGAAGGAAAAGTTCTTGGAAGAGTGTATTAACATTCGCCGTAACCCTCAACGACATCAGTTCTACTGTAAAATCTGCCCCCTTGAAAGAGCAAAGAACGATGATTGTTTAGAACCATGTAAAGGACACTTAAAGAGAAAGTTTATCAAAGAATGTTGGGTAAAGTGTGGCTGTGTGAAACAGTGTGGCAATAGGGTTGTCCAACGAGGAATCACATTCAATTTTCAGGTGTTTTTTACTTCAGAAGGAAAAGGATGGGGTCTTCGCACCTTAGAGGAGCTGCCAAAAGGTGCATTTGTGTGTCAATTTGTGGGAGAAATATTGACCGCCAAGGAGTTGCATGAGAGGAACATTCAGTGTGCCCAAAATGGAACATACACGTACCCAGTTCTATTAGATGCAGAGTGGGATTCAGGAGATATAAATGATAAAGAAGCTCTTTGCTTGGATGCAGCATCTTATGGGAATGTTGCTAGGTTTATAAATCACAGATGTTTGGATGCGAACTTGATTGAGATCCCAGTTGAAGTTGAAACCTCAGATCATCACTACTTTCATCTTGCTTTCTTCACATCCAGAAAAGTAGCTGCTTTGGAAGAGCTAACTTGGGATTATGGTATTGACTTTGACGACGATGAGGGTCCTGTCAAGCCATTCTCTTGCAGATGTGGCAGCAAGTTCTGCAGGAAGATGGAGCGATCAAATAGATCCAATAGATCTGCTCCTACCGCATGA 2535 0.4225 MWVSKLFLDFFPVVLGGAFNIHVSAGTETQIKMAPNPRVAAAYRAMTVLGIKEVQVKPVLKQLLKLYDKNWELIEQENYRVLADAIFEQAEKELQGKRQKNQNNDEGEMEDEEAQMRDESVRPFKRLRLRGQENQLSIGGTSSAASPSKMPKVEDDELPQQPQYKAMSPQSNRNVETEVRPVPVQDSLVNKGKQPLSSQDAPGGRRVGSERASPSVQLKEPTTERRIVLSQKNQLLYTHELIIPKDEPIDELVDYDAPIATINPELPSGRDHPMQHDATRKQGRNGPLMSKHRDVGRGDGIWDSSNEANHEVATNQECSAIEIASSTSGEVKLTMSCSSALGRSDFRLPSRDQLLKMMEDKCLQSYNITDPSFSVMKLLRDMCDCMLEFRTDSNDDSQEGSEMMTSSLNVLKESKTCDALVIRGNTEDLGMQADMSNGSINIQSSSALAASHISISPLLMTGMNDAVLVTNKARSDFPECEDGKGLEDPIRPHSGSLVAVQQHELTPDDLRSLHGADDLSKGEENLRIPWVNEITNDFPPPFHYLHHSIAFRDAYVNWCLSKIKCEDYCSTCLGDCLLSPTPCVCANKIEGGYAYTSEGRLKEKFLEECINIRRNPQRHQFYCKICPLERAKNDDCLEPCKGHLKRKFIKECWVKCGCVKQCGNRVVQRGITFNFQVFFTSEGKGWGLRTLEELPKGAFVCQFVGEILTAKELHERNIQCAQNGTYTYPVLLDAEWDSGDINDKEALCLDAASYGNVARFINHRCLDANLIEIPVEVETSDHHYFHLAFFTSRKVAALEELTWDYGIDFDDDEGPVKPFSCRCGSKFCRKMERSNRSNRSAPTA 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1701 844 Pfam Pre-SET motif 520 665 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco02g1701 844 MobiDBLite consensus disorder prediction 134 148 - -
Acco02g1701 844 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 33 840 - -
Acco02g1701 844 SMART preset_2 516 657 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco02g1701 844 MobiDBLite consensus disorder prediction 184 222 - -
Acco02g1701 844 MobiDBLite consensus disorder prediction 263 305 - -
Acco02g1701 844 MobiDBLite consensus disorder prediction 93 158 - -
Acco02g1701 844 ProSiteProfiles SET domain profile. 673 806 IPR001214 GO:0005515
Acco02g1701 844 Pfam Ubiquitin-binding WIYLD domain 38 92 IPR018848 -
Acco02g1701 844 SUPERFAMILY SET domain 525 830 IPR046341 -
Acco02g1701 844 Gene3D SET domain 519 831 IPR046341 -
Acco02g1701 844 SMART set_7 673 812 IPR001214 GO:0005515
Acco02g1701 844 Pfam SET domain 685 806 IPR001214 GO:0005515
Acco02g1701 844 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 10 842 IPR025776 -
Acco02g1701 844 MobiDBLite consensus disorder prediction 115 129 - -
Acco02g1701 844 Gene3D - 27 92 IPR043017 -
Acco02g1701 844 CDD SET_SETDB-like 540 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1701 Acco-ChrAcco02 13084786 13090497 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1701 649 831 C2H2 Transcription Factor Family AT2G23740 38.095 7.64e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco02g1701 Pre-SET 1.7e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1701 02 13084786 13090497 Acco02g1701 02 13084786 13090497 ECH