Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco02g1688 | ATGGCTATCTCCCAATTGCTCGATAAAATCTCTTCCACATTATCATTGCCATCGAGATTGCCGAACTCCCTTTTGACAACGATCATAGGACTGCCCGTTTTGGAATTAGCCGCAATATGCATCAACTTAACTATTCTTCTTGTATTTCTCCTGGTAATCTCAGCGAGGCAGATATTCGTGTGTGTTGGTCGAATTCGAATAAGCAAGGAAAATACGAATGGCGATCCAAATCCCATTCGTCGTACTTGTATCGACAGGAACCCACACGATGTTAGCATCGGTACGAGTTTCAAATTGGCATTGCTGTGTTGTTTCTATGTGCTCTTTGTTCAAGTTCTGGTGTTAGGATTTGATGCTGCTGCTTTGATCAGAGAATCGACTAATGGGAACACTGTGAACTGGTGGCTTCTTTCTTTGCCATCCGCGCAGGGTTTAGCTTGGTTTGTAATAAGCTTCTCTGCTTTGCATTGCAAATTCAACTTGTCTGAGAAGTTTCCCTTTTTGTTGAGAATTTGGTGGTTGGTCTCATTTGCTATTTGTTTGTGCACTTTGTACCTCGATGGGAGAAGACTTGTGGCGGAAGGCTCAAAACATCTTTCTTCTCATGTTGTGGCCAATTTTGCTGCCGCTCCGGCTCTTGCTTTCCAGTGCATTGTTGCAATTAGAGGTGTTACTGGCATAGAAGTTCGTAGAAACTCTGATCTTCAAGAGCCATTACTCGCTGAAGAAGAAGAAGAAGAACAAGCAGGTTGTCTCAAGGTTACTCCTTATAGTGATGCTGGGATTTTTAACTTAGCCACTCTCTCTTGGCTCAACCCTCTTCTCTCAATTGGGGCTAAGAGACCGCTTGAGCTCAAGGATATTCCCCTTCTTGCTCCAAAAGATCGAGCTAAGACAAATTATAGGATTTTGAACTCTAACTGGGAGAGATTGAAGGCTGAAAATCCTTCAAAGCAGCCTTCATTAGCTTGGGCAATTCTCAAGTCTTACTGGAAGGAGGCAGCTTGTAATGCCATCTTTGCTGGTATGAATACTCTAGTGTCGTATGTAGGTCCATACATGATAAGTTACTTCGTTGATTACTTAGGTGGTAAAGAGACATTCCCGTATGAAGGGTATATCCTCGCGGGGACATTTTTTGCTGCAAAGCTTGTGGAGACCTTGACGACAAGACAATGGTATTTGGGGGTGGACATCTTGGGTATGCACATCCGGTCGGCTCTAACAGCAATGGTATATCGAAAGGGACTCAGACTCTCAAGCTCGGCCAAGCAGAGTCACACAAGTGGGGAGATTGTTAACTACATGGCTGTGGATGTTCAGAGGGTGGGGGATTACTCTTGGTATCTTCATGACATGTGGATGCTTCCTCTTCAAATCATTCTCGCCCTTGCAATTTTGTACAAGAATGTTGGACGTGCTTCAATTGCTACATTGATTGCTACAATCATTTCCATTGTTGTTACTATTCCTGTGGCTAGGATTCAAGAAAATTTTCAAGACAAATTAATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCTGAATGCTTGAGAAATATGAGGATCCTCAAGTTGCAAGCTTGGGAAGATAGATATCGAATACAGTTGGAAGAAATGCGTAAAGTAGAATTCAAGTGGCTACGTAAAGCTCTCTATTCTCAGGCTTTCATCACTTTTATCTTTTGGAGCTCTCCTATATTTGTTTCGGCTATCACTTTTGGCACTTCAATATTGTTGGGAGATCAGTTGACTGCAGGAGCAGTTCTCTCCGCTCTCGCTACTTTCAGGATCCTTCAAGAGCCTTTGAGGAATTTTCCTGACTTGGTATCAACAATGGCCCAGACAAAAGTTTCTCTTGATCGCATATCTAGTTTCCTGCAAGAGGAAGAATTGCAAGTGGATGCAACTACCATCTTGCCACGAGGAACTTCTGACATTGCCATTGAAATTGAGGACGGATTCTTTGGCTGGGACCCTTCTTCTAGGCCTACTCTTTCGGGGATACAATTGCAAGTGAAAAAGGGCATGTGTGTGGCGGTTTGTGGCATGGTTGGTTCTGGGAAATCAAGCTTCCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCTGGTGAAGTTAGAGTGTGTGGTTCAGAAGCATATGTCTCCCAATCAGCATGGATACAATCAGGAAATATTGAAGAAAATATCCTTTTTGGAAGCCCCATGGATAAAGCAAAGTACAAGAGAGTTCTTCATGCTTGTTCACTGAAGAGGGACTTGGAACTTTTCTCTCATGGAGATCAAACAATTATAGGCGATCGAGGTATAAACTTGAGTGGAGGCCAGAAACAGCGGGTGCAGCTTGCACGAGCTCTTTATCAAAATGCTGATATTTATCTCCTTGATGATCCCTTCAGTGCAGTTGATGCTCATACTGGATCAGAACTGTTTAATGAATACATATTGACAGCACTAGCAGATAAAACAGTTATTTTTGTGACCCATCAAGTGGAATTTCTCCCTGCAGCTGATTTGATACTGGTTCTTAAGGAAGGCCGCATCATACAGGCAGGAAAATATGATGATCTTTTACAAGCTGGAACAGATTTTAAGACTCTAGTATCAGCTCATCATGAAGCCATTGAGGCTATGGATATTCCTGATCACTCAGAAGATTCAGATGAAAATGTGTCCTTGGAGTTGGAGGCGTCTGTTATGGCCAGTAAAACGTCCATCATATCTGCCAATGATATTGAAACTCTAGCAAAGGAAATGCAGGAGGTTTCATCAGTTTCAGATCAGAAAGCAATCAAGGAGAAGAAGAAAGCAAAACGGTCAAGGAAAAAACAGCTTGTTCAGGAGGAGGAGAGGGTAAGAGGTAGAGTCAGCATGAGAGTGTACTGGTCATACATGGCTGTGGCGTATAAAGGCTTACTGATTCCACTCATAATCATTGCACAAGCATTATTTCAGTTTCTTCAAATTGCAAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAAGGAGATCAACCCAGAGTAACTCCTATGGTTCTTCTTCTGGGGTACATGGCTCTTGCTTTTGGAAGCTCTTGGTTTATATTTGTAAGGGCTGTTCTGGTAGCTACATTTGGTCTAGCTGCTGCACAGAAACTTTTTATAAATATGCTTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTTGACTCCACGCCAGCGGGAAGGATATTGAATCGTGTATCAGTTGATCAGAGTGTTGTGGATCTCGACATTCCTTTTAGACTAGGAGGATTTGCTTCGTCAACAATACAACTTATTGGCATTGTTGGTGTGATGACAACGGTTACCTGGCAAGTTTTGCTTCTGGTTGTACCAATGGCTGTGGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCTTCAAGGGAGCTGGTTCGTATAGTAAGCATCCAGAAATCTCCTGTTATAAACCTTTTTGGTGAATCAATTGCTGGGGCAGCTACTATCAGGGGTTTTGGACAAGAAAAAAGGTTTATGAAGAGAAACCTCTATCTTCTGGACTCTTTTGCACGGCCATTCTTCTGCAGTCTCGCAGCGATTGAGTGGCTCTGCCTGCGTATGGAATTGTTGTCAACCTTCATATTTGCTTTCTGCATGATATTACTTGTGAGCTTTCCACATGGAAGTATTGACCCTAGCATGGCTGGACTTGCTGTGACGTATGGCTTGAATTTAAATGCACGCCTATCACGGTGGATCCTTAGCTTTTGCAAACTTGAGAATAAAATAATTTCAATTGAAAGGATTTATCAATACAGCCAAATTCCTAGTGAAGCACCTACTATTATTGAAGACACTCGCCCACCATCCACATGGCCTGAGAATGGGACAATCAGGATAATTGATTTGAAGGTTCGTTACAAGGAAAGTCTTCCATTGGTGCTTCGTGGAATAACATGCACATTTCCTGGTGAGAAGAATATTGGAATAGTTGGACGTACTGGCAGTGGCAAATCTACTTTGATACAAGCATTGTTTCGATTAGTTGAACCATCAAGTGGGAGTATCCTTATAGACGACATTAATATTACAAGCATTGGTCTTCATGACCTTCGAAGCCGTCTCAGTATCATACCTCAAGATCCAACCTTATTTGAAGGGACTATACGAGGCAATCTTGATCCTCTTGAAGAGCACTCTGATCAAGAGATTTGGGAGGCACTAAATAAGTCTCAGCTTGGAGAGATTATTCGTCAGAAAGATGAAAAGCTTGATACGCAAGTGCTTGAAAATGGAGATAATTGGAGCGTAGGGCAGCGACAACTTGTGGCGCTGGGACGGGCTTTATTGAAACAGTCAAGGATACTTGTACTTGATGAAGCAACAGCATCAGTTGATACAGCCACTGATAATCTTATACAGAAGATTATTCGGACAGAGTTTAGAGACTGCACTGTCTGCACTATTGCACATCGTATTCCTACTGTTATTGACAGTGATCTTGTTCTAGTCCTCAGTGATGGTCGAGTGGCAGAGTTTGACACGCCAACCCGACTATTAGAGGATAAGTCCTCCATGTTTCTGAAGTTGGTGACAGAGTATTCATCAAGGTCAAGTGGCATACCAGATTTTTGA | 4623 | 0.4246 | MAISQLLDKISSTLSLPSRLPNSLLTTIIGLPVLELAAICINLTILLVFLLVISARQIFVCVGRIRISKENTNGDPNPIRRTCIDRNPHDVSIGTSFKLALLCCFYVLFVQVLVLGFDAAALIRESTNGNTVNWWLLSLPSAQGLAWFVISFSALHCKFNLSEKFPFLLRIWWLVSFAICLCTLYLDGRRLVAEGSKHLSSHVVANFAAAPALAFQCIVAIRGVTGIEVRRNSDLQEPLLAEEEEEEQAGCLKVTPYSDAGIFNLATLSWLNPLLSIGAKRPLELKDIPLLAPKDRAKTNYRILNSNWERLKAENPSKQPSLAWAILKSYWKEAACNAIFAGMNTLVSYVGPYMISYFVDYLGGKETFPYEGYILAGTFFAAKLVETLTTRQWYLGVDILGMHIRSALTAMVYRKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPLQIILALAILYKNVGRASIATLIATIISIVVTIPVARIQENFQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRKVEFKWLRKALYSQAFITFIFWSSPIFVSAITFGTSILLGDQLTAGAVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISSFLQEEELQVDATTILPRGTSDIAIEIEDGFFGWDPSSRPTLSGIQLQVKKGMCVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSEAYVSQSAWIQSGNIEENILFGSPMDKAKYKRVLHACSLKRDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQNADIYLLDDPFSAVDAHTGSELFNEYILTALADKTVIFVTHQVEFLPAADLILVLKEGRIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPDHSEDSDENVSLELEASVMASKTSIISANDIETLAKEMQEVSSVSDQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMRVYWSYMAVAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDQPRVTPMVLLLGYMALAFGSSWFIFVRAVLVATFGLAAAQKLFINMLRSVFHAPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASSTIQLIGIVGVMTTVTWQVLLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPVINLFGESIAGAATIRGFGQEKRFMKRNLYLLDSFARPFFCSLAAIEWLCLRMELLSTFIFAFCMILLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTIIEDTRPPSTWPENGTIRIIDLKVRYKESLPLVLRGITCTFPGEKNIGIVGRTGSGKSTLIQALFRLVEPSSGSILIDDINITSIGLHDLRSRLSIIPQDPTLFEGTIRGNLDPLEEHSDQEIWEALNKSQLGEIIRQKDEKLDTQVLENGDNWSVGQRQLVALGRALLKQSRILVLDEATASVDTATDNLIQKIIRTEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPTRLLEDKSSMFLKLVTEYSSRSSGIPDF | 1540 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco02g1688 | 1540 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 645 | 870 | IPR027417 | - | |
Acco02g1688 | 1540 | Gene3D | ABC transporter type 1, transmembrane domain | 306 | 632 | IPR036640 | GO:0005524|GO:0016020 | |
Acco02g1688 | 1540 | Gene3D | ABC transporter type 1, transmembrane domain | 936 | 1275 | IPR036640 | GO:0005524|GO:0016020 | |
Acco02g1688 | 1540 | CDD | ABCC_MRP_domain2 | 1292 | 1512 | - | - | |
Acco02g1688 | 1540 | Coils | Coil | 932 | 952 | - | - | |
Acco02g1688 | 1540 | ProSitePatterns | ABC transporters family signature. | 773 | 787 | IPR017871 | GO:0005524|GO:0016887 | |
Acco02g1688 | 1540 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 338 | 615 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Acco02g1688 | 1540 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 977 | 1247 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Acco02g1688 | 1540 | SMART | AAA_5 | 1320 | 1505 | IPR003593 | GO:0016887 | |
Acco02g1688 | 1540 | SMART | AAA_5 | 675 | 856 | IPR003593 | GO:0016887 | |
Acco02g1688 | 1540 | FunFam | ABC transporter C family member 3 | 1277 | 1529 | - | - | |
Acco02g1688 | 1540 | FunFam | ABC transporter C family member 10 | 318 | 631 | - | - | |
Acco02g1688 | 1540 | Coils | Coil | 294 | 314 | - | - | |
Acco02g1688 | 1540 | Pfam | ABC transporter | 666 | 800 | IPR003439 | GO:0005524 | |
Acco02g1688 | 1540 | SUPERFAMILY | ABC transporter transmembrane region | 324 | 631 | IPR036640 | GO:0005524|GO:0016020 | |
Acco02g1688 | 1540 | Pfam | ABC transporter transmembrane region | 977 | 1219 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Acco02g1688 | 1540 | Pfam | ABC transporter transmembrane region | 339 | 603 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Acco02g1688 | 1540 | SUPERFAMILY | ABC transporter transmembrane region | 962 | 1274 | IPR036640 | GO:0005524|GO:0016020 | |
Acco02g1688 | 1540 | CDD | ABCC_MRP_domain1 | 649 | 848 | - | - | |
Acco02g1688 | 1540 | CDD | ABC_6TM_ABCC_D1 | 336 | 623 | IPR044746 | GO:0140359 | |
Acco02g1688 | 1540 | Gene3D | - | 644 | 877 | IPR027417 | - | |
Acco02g1688 | 1540 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1284 | 1524 | IPR027417 | - | |
Acco02g1688 | 1540 | FunFam | ABC transporter C family member 5 | 938 | 1275 | - | - | |
Acco02g1688 | 1540 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 649 | 871 | IPR003439 | GO:0005524 | |
Acco02g1688 | 1540 | Gene3D | - | 1277 | 1530 | IPR027417 | - | |
Acco02g1688 | 1540 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1294 | 1528 | IPR003439 | GO:0005524 | |
Acco02g1688 | 1540 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 258 | 1531 | - | - | |
Acco02g1688 | 1540 | Pfam | ABC transporter | 1312 | 1459 | IPR003439 | GO:0005524 | |
Acco02g1688 | 1540 | CDD | ABC_6TM_ABCC_D2 | 975 | 1269 | IPR044726 | GO:0140359 | |
Acco02g1688 | 1540 | FunFam | ABC transporter C family member 5 | 634 | 880 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco02g1688 | Acco-ChrAcco02 | 12970154 | 12976713 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco02g1688 | 650 | 864 | Calmodulin-binding Proteins | AT2G36910 | 30.769 | 1.70e-20 | 97.1 |