Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1688 ATGGCTATCTCCCAATTGCTCGATAAAATCTCTTCCACATTATCATTGCCATCGAGATTGCCGAACTCCCTTTTGACAACGATCATAGGACTGCCCGTTTTGGAATTAGCCGCAATATGCATCAACTTAACTATTCTTCTTGTATTTCTCCTGGTAATCTCAGCGAGGCAGATATTCGTGTGTGTTGGTCGAATTCGAATAAGCAAGGAAAATACGAATGGCGATCCAAATCCCATTCGTCGTACTTGTATCGACAGGAACCCACACGATGTTAGCATCGGTACGAGTTTCAAATTGGCATTGCTGTGTTGTTTCTATGTGCTCTTTGTTCAAGTTCTGGTGTTAGGATTTGATGCTGCTGCTTTGATCAGAGAATCGACTAATGGGAACACTGTGAACTGGTGGCTTCTTTCTTTGCCATCCGCGCAGGGTTTAGCTTGGTTTGTAATAAGCTTCTCTGCTTTGCATTGCAAATTCAACTTGTCTGAGAAGTTTCCCTTTTTGTTGAGAATTTGGTGGTTGGTCTCATTTGCTATTTGTTTGTGCACTTTGTACCTCGATGGGAGAAGACTTGTGGCGGAAGGCTCAAAACATCTTTCTTCTCATGTTGTGGCCAATTTTGCTGCCGCTCCGGCTCTTGCTTTCCAGTGCATTGTTGCAATTAGAGGTGTTACTGGCATAGAAGTTCGTAGAAACTCTGATCTTCAAGAGCCATTACTCGCTGAAGAAGAAGAAGAAGAACAAGCAGGTTGTCTCAAGGTTACTCCTTATAGTGATGCTGGGATTTTTAACTTAGCCACTCTCTCTTGGCTCAACCCTCTTCTCTCAATTGGGGCTAAGAGACCGCTTGAGCTCAAGGATATTCCCCTTCTTGCTCCAAAAGATCGAGCTAAGACAAATTATAGGATTTTGAACTCTAACTGGGAGAGATTGAAGGCTGAAAATCCTTCAAAGCAGCCTTCATTAGCTTGGGCAATTCTCAAGTCTTACTGGAAGGAGGCAGCTTGTAATGCCATCTTTGCTGGTATGAATACTCTAGTGTCGTATGTAGGTCCATACATGATAAGTTACTTCGTTGATTACTTAGGTGGTAAAGAGACATTCCCGTATGAAGGGTATATCCTCGCGGGGACATTTTTTGCTGCAAAGCTTGTGGAGACCTTGACGACAAGACAATGGTATTTGGGGGTGGACATCTTGGGTATGCACATCCGGTCGGCTCTAACAGCAATGGTATATCGAAAGGGACTCAGACTCTCAAGCTCGGCCAAGCAGAGTCACACAAGTGGGGAGATTGTTAACTACATGGCTGTGGATGTTCAGAGGGTGGGGGATTACTCTTGGTATCTTCATGACATGTGGATGCTTCCTCTTCAAATCATTCTCGCCCTTGCAATTTTGTACAAGAATGTTGGACGTGCTTCAATTGCTACATTGATTGCTACAATCATTTCCATTGTTGTTACTATTCCTGTGGCTAGGATTCAAGAAAATTTTCAAGACAAATTAATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCTGAATGCTTGAGAAATATGAGGATCCTCAAGTTGCAAGCTTGGGAAGATAGATATCGAATACAGTTGGAAGAAATGCGTAAAGTAGAATTCAAGTGGCTACGTAAAGCTCTCTATTCTCAGGCTTTCATCACTTTTATCTTTTGGAGCTCTCCTATATTTGTTTCGGCTATCACTTTTGGCACTTCAATATTGTTGGGAGATCAGTTGACTGCAGGAGCAGTTCTCTCCGCTCTCGCTACTTTCAGGATCCTTCAAGAGCCTTTGAGGAATTTTCCTGACTTGGTATCAACAATGGCCCAGACAAAAGTTTCTCTTGATCGCATATCTAGTTTCCTGCAAGAGGAAGAATTGCAAGTGGATGCAACTACCATCTTGCCACGAGGAACTTCTGACATTGCCATTGAAATTGAGGACGGATTCTTTGGCTGGGACCCTTCTTCTAGGCCTACTCTTTCGGGGATACAATTGCAAGTGAAAAAGGGCATGTGTGTGGCGGTTTGTGGCATGGTTGGTTCTGGGAAATCAAGCTTCCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCTGGTGAAGTTAGAGTGTGTGGTTCAGAAGCATATGTCTCCCAATCAGCATGGATACAATCAGGAAATATTGAAGAAAATATCCTTTTTGGAAGCCCCATGGATAAAGCAAAGTACAAGAGAGTTCTTCATGCTTGTTCACTGAAGAGGGACTTGGAACTTTTCTCTCATGGAGATCAAACAATTATAGGCGATCGAGGTATAAACTTGAGTGGAGGCCAGAAACAGCGGGTGCAGCTTGCACGAGCTCTTTATCAAAATGCTGATATTTATCTCCTTGATGATCCCTTCAGTGCAGTTGATGCTCATACTGGATCAGAACTGTTTAATGAATACATATTGACAGCACTAGCAGATAAAACAGTTATTTTTGTGACCCATCAAGTGGAATTTCTCCCTGCAGCTGATTTGATACTGGTTCTTAAGGAAGGCCGCATCATACAGGCAGGAAAATATGATGATCTTTTACAAGCTGGAACAGATTTTAAGACTCTAGTATCAGCTCATCATGAAGCCATTGAGGCTATGGATATTCCTGATCACTCAGAAGATTCAGATGAAAATGTGTCCTTGGAGTTGGAGGCGTCTGTTATGGCCAGTAAAACGTCCATCATATCTGCCAATGATATTGAAACTCTAGCAAAGGAAATGCAGGAGGTTTCATCAGTTTCAGATCAGAAAGCAATCAAGGAGAAGAAGAAAGCAAAACGGTCAAGGAAAAAACAGCTTGTTCAGGAGGAGGAGAGGGTAAGAGGTAGAGTCAGCATGAGAGTGTACTGGTCATACATGGCTGTGGCGTATAAAGGCTTACTGATTCCACTCATAATCATTGCACAAGCATTATTTCAGTTTCTTCAAATTGCAAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAAGGAGATCAACCCAGAGTAACTCCTATGGTTCTTCTTCTGGGGTACATGGCTCTTGCTTTTGGAAGCTCTTGGTTTATATTTGTAAGGGCTGTTCTGGTAGCTACATTTGGTCTAGCTGCTGCACAGAAACTTTTTATAAATATGCTTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTTGACTCCACGCCAGCGGGAAGGATATTGAATCGTGTATCAGTTGATCAGAGTGTTGTGGATCTCGACATTCCTTTTAGACTAGGAGGATTTGCTTCGTCAACAATACAACTTATTGGCATTGTTGGTGTGATGACAACGGTTACCTGGCAAGTTTTGCTTCTGGTTGTACCAATGGCTGTGGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCTTCAAGGGAGCTGGTTCGTATAGTAAGCATCCAGAAATCTCCTGTTATAAACCTTTTTGGTGAATCAATTGCTGGGGCAGCTACTATCAGGGGTTTTGGACAAGAAAAAAGGTTTATGAAGAGAAACCTCTATCTTCTGGACTCTTTTGCACGGCCATTCTTCTGCAGTCTCGCAGCGATTGAGTGGCTCTGCCTGCGTATGGAATTGTTGTCAACCTTCATATTTGCTTTCTGCATGATATTACTTGTGAGCTTTCCACATGGAAGTATTGACCCTAGCATGGCTGGACTTGCTGTGACGTATGGCTTGAATTTAAATGCACGCCTATCACGGTGGATCCTTAGCTTTTGCAAACTTGAGAATAAAATAATTTCAATTGAAAGGATTTATCAATACAGCCAAATTCCTAGTGAAGCACCTACTATTATTGAAGACACTCGCCCACCATCCACATGGCCTGAGAATGGGACAATCAGGATAATTGATTTGAAGGTTCGTTACAAGGAAAGTCTTCCATTGGTGCTTCGTGGAATAACATGCACATTTCCTGGTGAGAAGAATATTGGAATAGTTGGACGTACTGGCAGTGGCAAATCTACTTTGATACAAGCATTGTTTCGATTAGTTGAACCATCAAGTGGGAGTATCCTTATAGACGACATTAATATTACAAGCATTGGTCTTCATGACCTTCGAAGCCGTCTCAGTATCATACCTCAAGATCCAACCTTATTTGAAGGGACTATACGAGGCAATCTTGATCCTCTTGAAGAGCACTCTGATCAAGAGATTTGGGAGGCACTAAATAAGTCTCAGCTTGGAGAGATTATTCGTCAGAAAGATGAAAAGCTTGATACGCAAGTGCTTGAAAATGGAGATAATTGGAGCGTAGGGCAGCGACAACTTGTGGCGCTGGGACGGGCTTTATTGAAACAGTCAAGGATACTTGTACTTGATGAAGCAACAGCATCAGTTGATACAGCCACTGATAATCTTATACAGAAGATTATTCGGACAGAGTTTAGAGACTGCACTGTCTGCACTATTGCACATCGTATTCCTACTGTTATTGACAGTGATCTTGTTCTAGTCCTCAGTGATGGTCGAGTGGCAGAGTTTGACACGCCAACCCGACTATTAGAGGATAAGTCCTCCATGTTTCTGAAGTTGGTGACAGAGTATTCATCAAGGTCAAGTGGCATACCAGATTTTTGA 4623 0.4246 MAISQLLDKISSTLSLPSRLPNSLLTTIIGLPVLELAAICINLTILLVFLLVISARQIFVCVGRIRISKENTNGDPNPIRRTCIDRNPHDVSIGTSFKLALLCCFYVLFVQVLVLGFDAAALIRESTNGNTVNWWLLSLPSAQGLAWFVISFSALHCKFNLSEKFPFLLRIWWLVSFAICLCTLYLDGRRLVAEGSKHLSSHVVANFAAAPALAFQCIVAIRGVTGIEVRRNSDLQEPLLAEEEEEEQAGCLKVTPYSDAGIFNLATLSWLNPLLSIGAKRPLELKDIPLLAPKDRAKTNYRILNSNWERLKAENPSKQPSLAWAILKSYWKEAACNAIFAGMNTLVSYVGPYMISYFVDYLGGKETFPYEGYILAGTFFAAKLVETLTTRQWYLGVDILGMHIRSALTAMVYRKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPLQIILALAILYKNVGRASIATLIATIISIVVTIPVARIQENFQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRKVEFKWLRKALYSQAFITFIFWSSPIFVSAITFGTSILLGDQLTAGAVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISSFLQEEELQVDATTILPRGTSDIAIEIEDGFFGWDPSSRPTLSGIQLQVKKGMCVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSEAYVSQSAWIQSGNIEENILFGSPMDKAKYKRVLHACSLKRDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQNADIYLLDDPFSAVDAHTGSELFNEYILTALADKTVIFVTHQVEFLPAADLILVLKEGRIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPDHSEDSDENVSLELEASVMASKTSIISANDIETLAKEMQEVSSVSDQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMRVYWSYMAVAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDQPRVTPMVLLLGYMALAFGSSWFIFVRAVLVATFGLAAAQKLFINMLRSVFHAPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASSTIQLIGIVGVMTTVTWQVLLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPVINLFGESIAGAATIRGFGQEKRFMKRNLYLLDSFARPFFCSLAAIEWLCLRMELLSTFIFAFCMILLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTIIEDTRPPSTWPENGTIRIIDLKVRYKESLPLVLRGITCTFPGEKNIGIVGRTGSGKSTLIQALFRLVEPSSGSILIDDINITSIGLHDLRSRLSIIPQDPTLFEGTIRGNLDPLEEHSDQEIWEALNKSQLGEIIRQKDEKLDTQVLENGDNWSVGQRQLVALGRALLKQSRILVLDEATASVDTATDNLIQKIIRTEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPTRLLEDKSSMFLKLVTEYSSRSSGIPDF 1540
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1688 1540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 645 870 IPR027417 -
Acco02g1688 1540 Gene3D ABC transporter type 1, transmembrane domain 306 632 IPR036640 GO:0005524|GO:0016020
Acco02g1688 1540 Gene3D ABC transporter type 1, transmembrane domain 936 1275 IPR036640 GO:0005524|GO:0016020
Acco02g1688 1540 CDD ABCC_MRP_domain2 1292 1512 - -
Acco02g1688 1540 Coils Coil 932 952 - -
Acco02g1688 1540 ProSitePatterns ABC transporters family signature. 773 787 IPR017871 GO:0005524|GO:0016887
Acco02g1688 1540 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 338 615 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g1688 1540 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 977 1247 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g1688 1540 SMART AAA_5 1320 1505 IPR003593 GO:0016887
Acco02g1688 1540 SMART AAA_5 675 856 IPR003593 GO:0016887
Acco02g1688 1540 FunFam ABC transporter C family member 3 1277 1529 - -
Acco02g1688 1540 FunFam ABC transporter C family member 10 318 631 - -
Acco02g1688 1540 Coils Coil 294 314 - -
Acco02g1688 1540 Pfam ABC transporter 666 800 IPR003439 GO:0005524
Acco02g1688 1540 SUPERFAMILY ABC transporter transmembrane region 324 631 IPR036640 GO:0005524|GO:0016020
Acco02g1688 1540 Pfam ABC transporter transmembrane region 977 1219 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g1688 1540 Pfam ABC transporter transmembrane region 339 603 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g1688 1540 SUPERFAMILY ABC transporter transmembrane region 962 1274 IPR036640 GO:0005524|GO:0016020
Acco02g1688 1540 CDD ABCC_MRP_domain1 649 848 - -
Acco02g1688 1540 CDD ABC_6TM_ABCC_D1 336 623 IPR044746 GO:0140359
Acco02g1688 1540 Gene3D - 644 877 IPR027417 -
Acco02g1688 1540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1284 1524 IPR027417 -
Acco02g1688 1540 FunFam ABC transporter C family member 5 938 1275 - -
Acco02g1688 1540 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 649 871 IPR003439 GO:0005524
Acco02g1688 1540 Gene3D - 1277 1530 IPR027417 -
Acco02g1688 1540 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1294 1528 IPR003439 GO:0005524
Acco02g1688 1540 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 258 1531 - -
Acco02g1688 1540 Pfam ABC transporter 1312 1459 IPR003439 GO:0005524
Acco02g1688 1540 CDD ABC_6TM_ABCC_D2 975 1269 IPR044726 GO:0140359
Acco02g1688 1540 FunFam ABC transporter C family member 5 634 880 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco02g1688 Acco-ChrAcco02 12970154 12976713 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1688 650 864 Calmodulin-binding Proteins AT2G36910 30.769 1.70e-20 97.1