Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1661 ATGGCCGGCAAAGGAGAGGGTCCTGCTATTGGGATAGATCTGGGGACGACGTACTCGTGCGTCGGAGTCTGGCAACATGACCGCGTCGAGATTATTGCCAACGATCAGGGTAACCGGACTACACCGTCTTACGTTGGATTCACCGATTCTGAGCGTTTGATCGGGGATGCCGCCAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCCAAGAGACTGATTGGTCGTAGAATCAGTGACACCACTGTTCAGAATGACATTAAGTTATGGCCTTTTAAGGTCATTGCCGGCCCTGCTGACAAGCCAATGATCTCAGTCAACTACAAGGGTGAAGAGAAGCAATTTGCTGCGGAAGAAATATCTTCAATGGTTCTGATGAAGATGCGTGAGATTGCTGAGGCCTACCTGGGCTCCACAGTCAAGAACGCTGTCGTTACTGTCCCTGCTTACTTCAATGACTCCCAGCGTCAAGCTACCAAGGATGCTGGTGTTATTGCTGGCCTTAATGTTATGAGAATTATCAATGAGCCTACTGCGGCTGCCATTGCATATGGTCTTGATAAGAAGGCAACAAGTGTCGGCGAGAAGAATGTCTTGATTTTTGATCTTGGTGGTGGTACGTTTGATGTTTCTTTGCTCACCATTGAAGAGGGTATCTTTGAGGTGAAAGCCACAGCCGGGGACACTCATCTTGGAGGTGAGGATTTTGATAACAGGATGGTTAACCACTTTGTGCAGGAATTCAAGAGGAAGCACAAGAAGGACATCAGTAGCAACCCCAGATCACTCAGGAGGCTGAGAACTGCTTGTGAAAGGGCTAAAAGGACTCTTTCTTCCACCGCACAGACCACCATTGAAATTGATTCCTTGTATGAGGGAATTGATTTCTATGCCCCCATTACCCGTGCCAGATTTGAGGAGCTCAACATGGATCTCTTCAGAAAGTGCATGGAACCAGTTGAGAAATGTTTAAGGGATGCTAAGATGGATAAGAGGAGTGTTCATGATGTTGTTCTTGTTGGTGGATCCACTAGAATTCCCAAAGTTCAGCAACTTCTCCAAGATTTCTTTAATGGGAAGGAGCTCTGCAAGAGCATCAATCCTGATGAAGCTGTTGCATATGGTGCTGCTGTCCAGGCAGCTATCTTAAGCGGTGAAGGCAATGAGAAGGTCCAGGATCTTCTGCTTTTGGATGTAACCCCACTTTCACTTGGTTTGGAGACTGCTGGTGGGGTGATGACTGTGCTGATCCCCAGGAACACTACTATCCCAACAAAGAAGGAGCAGGTTTTCTCAACCTATTCTGACAACCAGCCTGGTGTGTTGATCCAAGTCTATGAAGGCGAGAGGACCCGAACCCGTGACAACAACTTGCTGGGTAAGTTTGAACTTTCTGGCATTCCTCCTGCTCCCAGAGGAGTCCCACAAATTACAGTGTGCTTTGACATTGATGCCAATGGTATCCTGAATGTGTCTGCTGAGGATAAAACTACTGGCCAAAAGAACAAGATCACCATCACAAATGATAAGGGTAGATTGTCGAAGGATGAGATTGAGAAGATGGTCCAAGAGGCTGAGAAGTACAAATCTGAGGATGAAGAGCACAAGAAGAAGGTAGAGGCAAAGAACGCGTTGGAGAATTATTCATACAACATGAGGAACACAGTGAGGGACGAGAAGATCGGAGGAAAACTTGATCCAGCTGACAAGAAGAAGATCGAGGATGTCATTGAGCAAGCTATCAATTGGCTGGACGCCAACCAGCTTGCAGAGGCAGATGAGTTTGAAGATAAGATGAAGGAATTGGAGAGCATATGCAACCCCATCATCGCCAAGATGTACCAGGGTGGTGCTGGTCCTGACATGGGTGCCTCTATGGATGATGATGATGCACCTCCATCTGGCGCAAGTGGTCCAGGCCCCAAGATCGAGGAAGTCGACTAA 1953 0.4762 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRRISDTTVQNDIKLWPFKVIAGPADKPMISVNYKGEEKQFAAEEISSMVLMKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISSNPRSLRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYAPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYSYNMRNTVRDEKIGGKLDPADKKKIEDVIEQAINWLDANQLAEADEFEDKMKELESICNPIIAKMYQGGAGPDMGASMDDDDAPPSGASGPGPKIEEVD 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1661 650 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Acco02g1661 650 Gene3D - 71 126 - -
Acco02g1661 650 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Acco02g1661 650 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Acco02g1661 650 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Acco02g1661 650 FunFam Heat shock 70 kDa 235 318 - -
Acco02g1661 650 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Acco02g1661 650 Gene3D - 10 384 - -
Acco02g1661 650 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Acco02g1661 650 Gene3D - 192 366 - -
Acco02g1661 650 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524|GO:0140662
Acco02g1661 650 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Acco02g1661 650 Gene3D - 545 619 IPR029048 -
Acco02g1661 650 MobiDBLite consensus disorder prediction 619 650 - -
Acco02g1661 650 FunFam Heat shock 70 kDa 391 545 - -
Acco02g1661 650 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Acco02g1661 650 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Acco02g1661 650 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Acco02g1661 650 PRINTS 70kDa heat shock protein signature 8 21 - -
Acco02g1661 650 PRINTS 70kDa heat shock protein signature 36 48 - -
Acco02g1661 650 PRINTS 70kDa heat shock protein signature 337 353 - -
Acco02g1661 650 PRINTS 70kDa heat shock protein signature 396 415 - -
Acco02g1661 650 PRINTS 70kDa heat shock protein signature 477 493 - -
Acco02g1661 650 PRINTS 70kDa heat shock protein signature 58 66 - -
Acco02g1661 650 PRINTS 70kDa heat shock protein signature 146 166 - -
Acco02g1661 650 PRINTS 70kDa heat shock protein signature 209 219 - -
Acco02g1661 650 PRINTS 70kDa heat shock protein signature 369 389 - -
Acco02g1661 650 FunFam Heat shock 70 kDa protein 539 650 - -
Acco02g1661 650 Coils Coil 521 541 - -
Acco02g1661 650 FunFam Heat shock protein 70 10 196 - -
Acco02g1661 650 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Acco02g1661 650 Gene3D Actin; Chain A, domain 4 235 318 - -
Acco02g1661 650 FunFam Heat shock 70 kDa protein 71 126 - -
Acco02g1661 650 FunFam Heat shock 70 kDa protein 197 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1661 Acco-ChrAcco02 12713657 12716110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1661 1 650 Calmodulin-binding Proteins AT3G12580 91.244 0.0 1211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1661 02 12713657 12716110 Acco06g0696 06 4581455 4583936 CCT
Acco02g1661 02 12713657 12716110 Acco06g0696 06 4581455 4583936 ECH
Acco02g1661 02 12713657 12716110 Acco02g1661 02 12713657 12716110 ECH
Acco06g0696 06 4581455 4583936 Acco02g1661 02 12713657 12716110 ECH