Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g1657 | ATGGCTTTGGGAAATGAATCGACTCCAACTCCATCCAACACCTCATCTTCTTTCCTGCCTACAGTTTGCTTGCACGATTGGTGGTTGGTTAAAGCTGAGAGGGACTTCCATGGGAAACTATTAGCTGTTGCTGGCTACTCCTCCAGAAAGCAAGATGCAAAGCGGGTGTTCGTTTCTGCTCCAATAACCAAAAGACATGATCTATCTACCTTGGAGACAGCAGATGGAATTTGTCTTATTCTTGTAGGTTTCATCAATGAGCTCCACACTAAGGAAAATGGCTTCCCGTGTGAGGTTTTCAATGATTTTCTATTTGGCTTTCCTCCTGATTGGGAAAGCCGTGTTGTTAACTTCTTCAAAGAAGTTGCTACTGGCATTGATACAGGAAATATCATTACTTCTAATGAAGAGGAACCACAAAGTCCAGTTACACCCATTCAGTCACAGGGGGAAATAAATGAGTTGTCAGAACATTCTGTTGAAGGATCTGCATCTCGAAAATCTAGGACTCGGCTGGGAAATACTGAAAATCGATATAGCACAAGAAAAGTGGTCCTCGGGCATACTAGACCAAAAATGACCAAGTCTGACAGAAAAATGACTTGGTCTAAATCAGCTGATCCTAAAAGAAATATAAAGCCCATTTCAGCTGACACTACTAGGGGAAGCCCATCTGTTAAGAGAAGTAAAAAGAGAATTAATTTTGATTCACATGAGAAATTATCTGCAGCCACTCCAGATTTATCTAATTGTAGGAGATCCAGATCAGGTAGGCTGCTTCTTCCTCCTCTGGAGTTCTGGCGCAATCAGATGCCTGTTTATGATGCGGACCATGGCCTAACTGAAATCCTGGATGGTGCGTCTTTTTTATCTCCTTGTAGCAGAAGTGTAGCACAATCCCAGAAAAAGCCGAGGAAAACATCGAAGACCGAGTCCTCTCAGTGCATCGCTCTCGGGATTTCTGTCACTTACTCGGTGAAAATGTCGGGTCGTGGAAAGGGAGGCAAGGGTTTGGGCAAGGGAGGAGCCAAGAGACACAGGAAGGTTCTTCGCGATAACATTCAGGGTATTACCAAGCCTGCGATTCGCCGATTGGCTCGTAGAGGTGGAGTTAAGCGTATTAGCGGTCTTATCTATGAGGAGACTCGCGGTGTTCTGAAGATTTTCCTCGAGAACGTTATTCGTGATGCTGTGACCTATACTGAGCACGCCAGGAGGAAGACGGTGACTGCTATGGATGTCGTCTATGCGCTGAAGAGGCAGGGTAGGACATTGTACGGTTTCGGCGGTTGA | 1293 | 0.4517 | MALGNESTPTPSNTSSSFLPTVCLHDWWLVKAERDFHGKLLAVAGYSSRKQDAKRVFVSAPITKRHDLSTLETADGICLILVGFINELHTKENGFPCEVFNDFLFGFPPDWESRVVNFFKEVATGIDTGNIITSNEEEPQSPVTPIQSQGEINELSEHSVEGSASRKSRTRLGNTENRYSTRKVVLGHTRPKMTKSDRKMTWSKSADPKRNIKPISADTTRGSPSVKRSKKRINFDSHEKLSAATPDLSNCRRSRSGRLLLPPLEFWRNQMPVYDADHGLTEILDGASFLSPCSRSVAQSQKKPRKTSKTESSQCIALGISVTYSVKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG | 430 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g1657 | 430 | CDD | H4 | 345 | 428 | IPR001951 | GO:0003677|GO:0030527 | |
| Acco02g1657 | 430 | MobiDBLite | consensus disorder prediction | 191 | 230 | - | - | |
| Acco02g1657 | 430 | Pfam | Centromere kinetochore component CENP-T histone fold | 369 | 423 | IPR035425 | - | |
| Acco02g1657 | 430 | MobiDBLite | consensus disorder prediction | 155 | 175 | - | - | |
| Acco02g1657 | 430 | PANTHER | KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG | 166 | 286 | - | - | |
| Acco02g1657 | 430 | MobiDBLite | consensus disorder prediction | 191 | 206 | - | - | |
| Acco02g1657 | 430 | Gene3D | Histone, subunit A | 329 | 430 | IPR009072 | GO:0046982 | |
| Acco02g1657 | 430 | ProSitePatterns | Histone H4 signature. | 342 | 346 | IPR019809 | GO:0000786|GO:0003677 | |
| Acco02g1657 | 430 | FunFam | Histone H4 | 329 | 430 | - | - | |
| Acco02g1657 | 430 | PRINTS | Histone H4 signature | 367 | 387 | IPR001951 | GO:0003677|GO:0030527 | |
| Acco02g1657 | 430 | PRINTS | Histone H4 signature | 347 | 366 | IPR001951 | GO:0003677|GO:0030527 | |
| Acco02g1657 | 430 | PRINTS | Histone H4 signature | 404 | 416 | IPR001951 | GO:0003677|GO:0030527 | |
| Acco02g1657 | 430 | PRINTS | Histone H4 signature | 389 | 403 | IPR001951 | GO:0003677|GO:0030527 | |
| Acco02g1657 | 430 | PRINTS | Histone H4 signature | 416 | 427 | IPR001951 | GO:0003677|GO:0030527 | |
| Acco02g1657 | 430 | PRINTS | Histone H4 signature | 332 | 343 | IPR001951 | GO:0003677|GO:0030527 | |
| Acco02g1657 | 430 | SMART | h44 | 343 | 417 | IPR001951 | GO:0003677|GO:0030527 | |
| Acco02g1657 | 430 | SUPERFAMILY | Histone-fold | 318 | 427 | IPR009072 | GO:0046982 | |
| Acco02g1657 | 430 | Pfam | SANTA (SANT Associated) | 22 | 113 | IPR015216 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco02g1657 | Acco-ChrAcco02 | 12678691 | 12683520 | Wgd |
Transcription factors information