Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1655 ATGGAGGTCAAATCTCCCTATCGTTCAACATGTTCAGCTGGACATCCTTTTCTTTTCTTTTCTTTTTCATATTGGTGGATCCTCTCACTATTCCGAAGCACCCACGAAAAAAGAAGCCGAAGGAAGGGAGAGAGGATCGTTTCACTCTATTCTGATCAGATCGTCCTATTTATCTCATTTCCTGTCGGCGTTCGAGCATCTAATTCAGATCCATCATATAGGATATTGATGGCGGCAGCGAGGCGGCTCCGGGACCTGCAAGCCCAACCGGGGAACAGGATCTGCGTTGATTGCGCTCAAAAGAACCCTCAATGGGCTTCCGTCTCCTATGGAGTTTTCATGTGCTTAGAATGCTCCGGCAAGCACCGTGGCCTCGGTGTCCACATCTCCTTTGTCCGATCCGTTACGATGGATTCCTGGTCCGAAATTCAGATCAAGAAGATGGAAGCAGGTGGTAATGAGAAATTCAACGCCTTCCTTGCCCAGTATGGTATCGCCAAGGAGACCGATATTGTGGCCAAGTACAATACTAATGCGGCTAGCATTTATAGGGATCGAATTCAGGCCCTTGCCGAGGGACGAACGTGGCGGGATCCACCGGTTATTAAGGAGAACCTTGGCTCTGGGAAGAGTAAACCTCCGTTGCCCAAAAGTGGAAACGATGGAGGCTGGGATAGCTGGGATAACGATGACGGGGTCAGATCTCCCCATGACTTCAAGCGCAACATGTCTACGGGGGATGTAAGGGGGTTCAATGGAGGTTCGACCGGTAGCAGGCCCTCGAGATCGAGGTCGACGGAGGATATCCACACGCGGTCGCAATTGGAGGCTTCCGCTGCCAACAAAGATAACTTTTTCGCTCGCAAGATTGCAGAGAACGAATCACGACCCGAAGGGATTGCACCCTCTCAAGGAGGCAAGTACGTTGGATTCGGATCTAGCCCCGCACCTCCCCGGGTGAATAACCAACAAAACGATGTCTTCTCAGTCATGTCTCAGGGATTTGGTAAATTGTCTTTGGTTGCTGCCTCCGCGGCTCAGTCTGCTGCTAATGTTGTTCAGTCTGGCACTAAAGAGATCGCTACCAAGGTAAAGGATGGTGGCTATGATCACAGAGTCAATGAAACTGTCAATGTTGTCTCCCAGAAGACATCAGAGATTGGACAGAGGACGTGGGGAATTATGAAGGGGGTCGTTGCTTTGGCTTCGCAGAAGGTTGAGGAGTACACCAGAGATAACCCCAATGGGACAGCTGATAATTGGCGGCGAAATGAAAATGAGAGAAATGGCTATTATCAAGAATATAGTCAAGAGAATAAAGGTTGGAATTCTTCTAGTGGAGGAGGACAACCTTCATCAGCTGGGCAGAATAATACTTATCATTCAAGCTCATGGGATGATTGGGACATTTGA 1413 0.4912 MEVKSPYRSTCSAGHPFLFFSFSYWWILSLFRSTHEKRSRRKGERIVSLYSDQIVLFISFPVGVRASNSDPSYRILMAAARRLRDLQAQPGNRICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNEKFNAFLAQYGIAKETDIVAKYNTNAASIYRDRIQALAEGRTWRDPPVIKENLGSGKSKPPLPKSGNDGGWDSWDNDDGVRSPHDFKRNMSTGDVRGFNGGSTGSRPSRSRSTEDIHTRSQLEASAANKDNFFARKIAENESRPEGIAPSQGGKYVGFGSSPAPPRVNNQQNDVFSVMSQGFGKLSLVAASAAQSAANVVQSGTKEIATKVKDGGYDHRVNETVNVVSQKTSEIGQRTWGIMKGVVALASQKVEEYTRDNPNGTADNWRRNENERNGYYQEYSQENKGWNSSSGGGQPSSAGQNNTYHSSSWDDWDI 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1655 470 MobiDBLite consensus disorder prediction 199 280 - -
Acco02g1655 470 MobiDBLite consensus disorder prediction 430 470 - -
Acco02g1655 470 MobiDBLite consensus disorder prediction 227 244 - -
Acco02g1655 470 PRINTS HIV Rev interacting protein signature 111 128 IPR001164 GO:0005096
Acco02g1655 470 PRINTS HIV Rev interacting protein signature 92 111 IPR001164 GO:0005096
Acco02g1655 470 PRINTS HIV Rev interacting protein signature 132 153 IPR001164 GO:0005096
Acco02g1655 470 MobiDBLite consensus disorder prediction 410 470 - -
Acco02g1655 470 SMART arf_gap_3 80 196 IPR001164 GO:0005096
Acco02g1655 470 Pfam Putative GTPase activating protein for Arf 81 170 IPR001164 GO:0005096
Acco02g1655 470 ProSiteProfiles ARF GTPase-activating proteins domain profile. 80 196 IPR001164 GO:0005096
Acco02g1655 470 FunFam ADP-ribosylation factor GTPase-activating protein 74 205 - -
Acco02g1655 470 MobiDBLite consensus disorder prediction 248 262 - -
Acco02g1655 470 CDD ArfGap_ArfGap1 79 193 - -
Acco02g1655 470 Gene3D Arf GTPase activating protein 76 205 IPR038508 -
Acco02g1655 470 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 77 469 IPR044519 GO:0005096|GO:0016192
Acco02g1655 470 SUPERFAMILY ArfGap/RecO-like zinc finger 81 187 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1655 Acco-ChrAcco02 12669102 12674184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1655 81 163 C2H2 Transcription Factor Family AT4G05330 51.190 1.27e-23 99.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1655 02 12669102 12674184 Acco02g1655 02 12669102 12674184 ECH