Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1634 ATGATGAAGAGAGAGAGAGATTGCGAGACGTTGGACTTGGCCAATTGTCTCATGCTGCTTTATCATCATCAACAACAAACAAGGGTTGATAGTAAAACTAGTTCAGAATTTGAGTGTAAGACGTGCAAGCGCAAGTTCTCGTCGTTTCAGGCGCTGGGAGGTCACAGAGCGAGCCACAAGAGGCCCAAGCTGGACGCCCAAGACGACCTCAAAGCAGAGGCCAAATCTCTGAGGTTGGGCAACAAACCCAAGACGCATGAGTGTTCTATTTGTGGCGTTGAGTTCTCGCTCGGCCAAGCACTCGGCGGCCACATGAGAAAGCACAGAGCCGCTCTTCACCAAGAGAACAACGACCAAGTACTGGACAATATAGTGGCCAAGGTGCCTATTCTTAAGAGGTCTAACAGTAAAAGGGTGTTGTGTTTGGACCTCAACTTGACGCCTCTCCAGAATGACTTGAACTTGTTTTCAAGCATGGCTCCCGCCTTCACTTAA 495 0.4909 MMKRERDCETLDLANCLMLLYHHQQQTRVDSKTSSEFECKTCKRKFSSFQALGGHRASHKRPKLDAQDDLKAEAKSLRLGNKPKTHECSICGVEFSLGQALGGHMRKHRAALHQENNDQVLDNIVAKVPILKRSNSKRVLCLDLNLTPLQNDLNLFSSMAPAFT 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1634 164 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Acco02g1634 164 SUPERFAMILY beta-beta-alpha zinc fingers 37 108 IPR036236 -
Acco02g1634 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Acco02g1634 164 SMART c2h2final6 86 108 IPR013087 -
Acco02g1634 164 SMART c2h2final6 37 59 IPR013087 -
Acco02g1634 164 PANTHER ZINC FINGER PROTEIN ZAT5 5 151 - -
Acco02g1634 164 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Acco02g1634 164 Gene3D Classic Zinc Finger 34 108 - -
Acco02g1634 164 Pfam C2H2-type zinc finger 86 110 - -
Acco02g1634 164 Pfam C2H2-type zinc finger 37 62 - -
Acco02g1634 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 108 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1634 Acco-ChrAcco02 12521347 12521841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1634 2 153 C2H2 Transcription Factor Family AT2G37430 48.485 7.27e-44 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco02g1634 zf-C2H2_6 2.4e-10 CL0361