Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1633 ATGGTGTCAGTAACGCCTGATCAATCTAAGAAGGTGGGGTTGGGACTTTCAGCGTCTCCATCTCCATTTCTTACTCCACGACCAGAGCGGCGACGCCCCGATTCAAGAGGCTCAGACTGGAACCCTAACCGTCAAGACAAGGATAAAGAGACTAACGTGCAAGTTTTGCTTAGATGCAGGCCATTAAGCGAGGATGAACTAAGGTTGAATATTCCCAGCATGGTGTCATGTAGTGAGTATAAAAGAGAAGTCACCGTTACGCAAACTCTAGCTAACAAGCAAATAGACAGAGTTTTTGCCTTTGATAAGGGTGGAGATTTACCAGTCGAGGCTGGTGTTATTCCTAGGGCAGTTCGCCAGATTTTTGATATGTTGGAAGCACAGAATGCTGACTATACCATGAAAGTGACATTTCTTGAGCTTTACAATGAAGAAATTACCGATTTATTGGCCCCTGAAGACAATTCTAGGTCTGTAGAAGAAAAGCAAAAGAAACCTCCTACTCTTATGGAAGATGGGAAGGGCTGTGTGGTTGTGAGAGGTCTAGAAGAAGAATCCGTGTATGGAGTAAATGAAATTTATGCCCTGTTAGAACGTGGGGCATCAAAAAGACGCACAGCAGATACATTGCTTAACAAGCGAAGCAGCCGCTCACATTCAGTCTTAACAATTACCATCTATGTGAAAGAAGCAGTCATTGGTGGTGAGGAACTGATTAAATGTGGAAAGCTTAATCTAGTTGATTTGGCAGAAACATTAAGTACACTGGATTATGCTAGTCGTGCTAAGAACATAAAGAATAAGCCCGAGGCGAACCAAAAGTTTTCAAAGGCTGTTTTGCTGAAGGACTTGTACGCGGAAATTGAGAGGATGAAAGAAGATGTTCGAGCAGCAAGAGAAAAGAATGGTGTATATGTTCCTCATGAGAGATTTGCTAGGGAGGAAGCAGAAAAGCAGGCAAGAAATGAGAAGATAGAGCAATTGGAGAGTGACCTCAGTCTTAGTGAGAAGGAAGTGGACAAGTTCCGTGAGCTCTACCAAAATGAGCAAGAACAGAAACTAGATTTGGAATGCGAGCTTAAGGATTGCAAGGTAAATTTGGAGAAAACAAGCAGTGCTTTGCAAGATCTCCAAGAGAATTATAGTCAAGTAGTGTCAACTTTGAAGGAGAAAGAGTTCACAATTTCCAAGTTTTTGAAATCGGATCTGCAGAATGCATCAAATGACATTGATTCACTGTCCCTGAAGTTGGATAAGAAAACCAAGGTGGAGGCTGAAAATCAGAAAATAATCTTGAATTTTGGTTCTCTACTGAATCAGAGATTAGGAGACCTACATAACTCGATCATGGGGTCAATTTCTCAGCAACAGGAACAACTAAGATGCATTGAAGACCATGCCAGTTCTTATCTTACAAGTAAAAGTGAAGCAGCTCAAGCATTAGAAACAAGGATCAAGAAAATGACTGAGATATATACTTCAGGAACAGGGGTCCTGAAGGAGCTAGCCAACACACTTCATGTAAAAGTTTCATCTGATATGGAGCAGATCCAATCTAAAGTGTCATCCCAGATATTGGCTGCTGAGAACTTTCTCAACACTGCTGTGCTCGAGGCTAAGGATGTTATATGCAGCATTCAGAATTCTGTTGATGAGCAAAAACATCTGTTAGAATTCTCCATTCAACAACAACAGGAGGGATTGAAGCAGAGTCTTATATCAGCACAAATGATTTCGGAGGCAACTTTGAACTTCTTCGATGACATTCATCAGCACTCTTCAAGAGTGGTGAAAATCATTGAAGAAACTCAACATGAGAGAACCGACAAATTAGCTCAATTTGAGCAGTTGTTCAAGGAAGAGGCTGCTAGAGAGGAAGAGCAGGCCTTAGGAAAAATCGCAGCAATTTTAGCAGACTTGACATCTAAGAGAACTGCTAGGGTCTCAGAGGCATCAAGAAATATGCAGGACGCAAACATGAAAGAGTCTCAGAGATTAGAGCTTGAGATGCACAGCATGCAGCAAATTTCAGAAGATGCTACAAGGGAAGTTGGTAAATATGCAGAGAATGTAAAAAGTCATTTCACGGCACAATCGGTCTCTGCAAGTGAATCTAAAGCGTTAATGGAAGATTGTCTCCATGACTGATTTGATGTTAACACTGCTTTTGTGATTCATCTCAATGGTGAGAGTTTTGATTTGACTTTGTCTTTACTGTGTATGGGTCTCTCGAAGAGTGTGCGCCATGCAAGGGAGCAGTGGGAAAATGTGCAGACGTCCTTGAACAATCTCAACAAGAACAATCTAGCAGAGATAGAAAATACAGTAAAGGCAAATATAAACTCAAACTACGCTCTAAATCAAGAATTTGTGTCTGCATCATCTTGCATGGATACAGATTATGATGTGGGAACCCACAACTTGGTAGAAGCTGTAAATGATTCACTAATGTTGGACCATGAGAACAAGAAGGAAATTGATTCTATGACTACACAGTGGTCGGAGCAGCTCCGTTCTGTACTAGAGAAGCATGGTGAAAGCATATCAAGCATCCAAACCCAAGCAGAACAGTGCCTTGAAAATGATTACTTGATTGATGAGCATACAGGTCTAACACCAAAGAAACGAGTGATAGCTGTGCCCAGCCCTGCATCTATTGAAGAGATGAGGACACAAATCACTGAAGAAGAAAACTCCTCAGAGAAGAGATCCAAATGGATGATGATCCAAGCAGAGTCCAAAATTCCGCGTCTAACATTAGCATCTCCAAATCGGACTCCTTTTGCAGACATTCAGGACATGTTGGTGGAAGGAACAGAGCAAGCCATATCTGAAGTCTTCGCACGAAGTTGCTTGGCCTTTTCTTTACGGAATGTGTATTCTAATTTTCAAAGCCAAAACGCAGAGAGCTTAGATCTAGCAATCTCTCTAATGCTTCTCTCTCAACCACAACACAAGCCCTTCAAAATCTCCCATGAGTTTGAATGCAAAACCTGCAACCGCAAGTTCTCTTCGTTTCAGGCGCTCGGAGGTCACAGAGCCAGCCACAAGAAACCCAAACTTGATTCTGAAGCAGAGCTACAAAAACCCAATTCTCAGAAATCGTTGCACGAGTGTTCTATTTGTGGCCAGAGATTCTCTCTGGGACAAGCGTTAGGCGGCCACATGAGAAAGCACAGAGCAGCCATGAACGAAGAAGCCCCAGCTGCTTCCATAAATGAGGCGGTTGTTTCCGATGTCTCTGTTTTCAAGCGATCTAACAGCAGCAAGAGAGTTATGTGCTTGGACTTGAATTTAACCCCTCTCGAGAATGACTTGAAGTTGCTTTTCGGAAACAAGGCTCCTTCCATTAATCTCTCCTTGTGCTGA 3369 0.4227 MVSVTPDQSKKVGLGLSASPSPFLTPRPERRRPDSRGSDWNPNRQDKDKETNVQVLLRCRPLSEDELRLNIPSMVSCSEYKREVTVTQTLANKQIDRVFAFDKGGDLPVEAGVIPRAVRQIFDMLEAQNADYTMKVTFLELYNEEITDLLAPEDNSRSVEEKQKKPPTLMEDGKGCVVVRGLEEESVYGVNEIYALLERGASKRRTADTLLNKRSSRSHSVLTITIYVKEAVIGGEELIKCGKLNLVDLAETLSTLDYASRAKNIKNKPEANQKFSKAVLLKDLYAEIERMKEDVRAAREKNGVYVPHERFAREEAEKQARNEKIEQLESDLSLSEKEVDKFRELYQNEQEQKLDLECELKDCKVNLEKTSSALQDLQENYSQVVSTLKEKEFTISKFLKSDLQNASNDIDSLSLKLDKKTKVEAENQKIILNFGSLLNQRLGDLHNSIMGSISQQQEQLRCIEDHASSYLTSKSEAAQALETRIKKMTEIYTSGTGVLKELANTLHVKVSSDMEQIQSKVSSQILAAENFLNTAVLEAKDVICSIQNSVDEQKHLLEFSIQQQQEGLKQSLISAQMISEATLNFFDDIHQHSSRVVKIIEETQHERTDKLAQFEQLFKEEAAREEEQALGKIAAILADLTSKRTARVSEASRNMQDANMKESQRLELEMHSMQQISEDATREVGKYAENVKSHFTAQSVSASESKALMEDCLHDXFDVNTAFVIHLNGESFDLTLSLLCMGLSKSVRHAREQWENVQTSLNNLNKNNLAEIENTVKANINSNYALNQEFVSASSCMDTDYDVGTHNLVEAVNDSLMLDHENKKEIDSMTTQWSEQLRSVLEKHGESISSIQTQAEQCLENDYLIDEHTGLTPKKRVIAVPSPASIEEMRTQITEEENSSEKRSKWMMIQAESKIPRLTLASPNRTPFADIQDMLVEGTEQAISEVFARSCLAFSLRNVYSNFQSQNAESLDLAISLMLLSQPQHKPFKISHEFECKTCNRKFSSFQALGGHRASHKKPKLDSEAELQKPNSQKSLHECSICGQRFSLGQALGGHMRKHRAAMNEEAPAASINEAVVSDVSVFKRSNSSKRVMCLDLNLTPLENDLKLLFGNKAPSINLSLC 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1633 1122 SMART c2h2final6 1037 1059 IPR013087 -
Acco02g1633 1122 SMART c2h2final6 994 1016 IPR013087 -
Acco02g1633 1122 ProSitePatterns Zinc finger C2H2 type domain signature. 1039 1059 IPR013087 -
Acco02g1633 1122 MobiDBLite consensus disorder prediction 1 15 - -
Acco02g1633 1122 Coils Coil 311 380 - -
Acco02g1633 1122 Pfam C2H2-type zinc finger 1037 1061 - -
Acco02g1633 1122 Pfam C2H2-type zinc finger 994 1019 - -
Acco02g1633 1122 MobiDBLite consensus disorder prediction 27 51 - -
Acco02g1633 1122 Pfam Kinesin motor domain 109 250 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco02g1633 1122 Gene3D Kinesin motor domain 104 250 IPR036961 -
Acco02g1633 1122 SMART kinesin_4 50 273 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco02g1633 1122 MobiDBLite consensus disorder prediction 1 51 - -
Acco02g1633 1122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 305 IPR027417 -
Acco02g1633 1122 Coils Coil 396 423 - -
Acco02g1633 1122 Coils Coil 747 767 - -
Acco02g1633 1122 ProSitePatterns Zinc finger C2H2 type domain signature. 996 1016 IPR013087 -
Acco02g1633 1122 ProSiteProfiles Zinc finger C2H2 type domain profile. 994 1021 IPR013087 -
Acco02g1633 1122 Coils Coil 281 301 - -
Acco02g1633 1122 ProSiteProfiles Zinc finger C2H2 type domain profile. 1037 1064 IPR013087 -
Acco02g1633 1122 SUPERFAMILY beta-beta-alpha zinc fingers 994 1059 IPR036236 -
Acco02g1633 1122 Coils Coil 663 683 - -
Acco02g1633 1122 Gene3D Kinesin motor domain 251 297 IPR036961 -
Acco02g1633 1122 ProSiteProfiles Kinesin motor domain profile. 1 250 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco02g1633 1122 PANTHER KINESIN-LIKE PROTEIN KIF11 47 103 IPR047149 -
Acco02g1633 1122 Gene3D Classic Zinc Finger 992 1059 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1633 Acco-ChrAcco02 12501690 12514191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1633 961 1121 C2H2 Transcription Factor Family AT2G37430 47.429 1.02e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco02g1633 Kinesin 3.3e-35 CL0023