Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1618 ATGTCTCAACCGCCTCCACCGTTATCCTTGTCGCCCTCTGGCGACAGATGTACCTTCTTCAATCAATCCATGGAGCTCGTCCAACTCCCATATCAAAGGTCAGGCAGAGCGCACGTCTCCCGTAGCCCCTCCCTCGCCGACCTCCTTAAACGCGTCGGAGATGCTCAAAACGACACCGTCTCCCAAGCACACCAAGTCCTCGATCTCGCTCCTTCTCCTTCTCCCTCTTACTCTTTTATCCTTTCCTTCACCCACTTGACTTACAACATCAGAGTCCGCCGTAAAATGAGCCTCTCCTCTTGCTTCTCTAGAAAACACGTGGATTTAAATTCCCAGACGCCGGAAGTTCATGGCGTGGCTGGATCCGAATCCGAATCAAAGACTAACGCTACTAAAGTTCTGCTCAATGATATTTCCGGCGAGGCCCGTGATGGAGAAATCATGGCCGTTCTTGGCGCCAGTGGGTCCGGCAAATCAACACTGATCGACGCCCTCGCCAACAGAATATCCAAAGAGAGCTTGAAAGGAACCATCACGTTAAACGGTGAAGCTTTAGATTCTAGTCTTCTGAAAGTGATATCAGCTTACGTCATGCAGGACGACCTCCTCTTTCCCATGCTCACCGTGGAAGAGACCCTCATGTTCTCCGCCGAGTTCAGGCTTCCTCGCTCCCTCTCTAAGTCCAGAAAGAAGGCCAGAGTCCAAGCTCTCATAGACCAGTTGGGCCTCCGTAACGCCGTCAATACCGTCATCGGTGACGAAGGCCACCGTGGCGTATCCGGTGGTGAACGACGTCGTGTCTCCATCGGAATTGACATAATTCACGACCCCATCGTGTTGTTCCTGGACGAACCTACCTCGGGCCTTGACTCCACCAGCGCCTACATGGTCGTCAAGGTCCTACAACGAATAGCTCAAACCGGAAGCATCGTCATCCTGTCCATACACCAACCAAGTTACAGAATCGTCGGATTATTAGACCGGTTGATTTTCCTCTCACATGGCCAAACCGTATACAGCGGTTCCCCGGCGAATCTGCCGCGATTCTTCTCGGAGTTCGGCAATCCGATCCCCGATAACGAGAACCGCACCGAGTTCGCCCTCGACGTCATTCGTGAGCTCGAACAAAACCCTGGTGGGACCACTGGCTTAGTGGAATTCAGCAAGTCTTGGCAATCGCATCAAATGAAAACCAAACCAACCAACGGCCATGAAACCTCCCATATTAACGGACAAAAGGTTTCGCTCAAGGACGCCATTGGCGCTAGTATTTCTAGAGGCAAGCTGGTCTCAGGGGCGCCAAATAATTCGAATAATCTCACGATATCTACGTCTGTTCCAACCTTTGCAAACCCCTTTTGGATCGAAATGGCTGTGATAGCGAAACGAGCGATGATCAATTCCAGAAGAATGCCTGAACTGTTTGGCATTCGATTGGGTGCGGTTCTGGTCACCGGAATCATCCTGGCCACTATCTTCTGGCATGTGGATAATTCCCCTAAAGGTGCTCAAGAACGATTAGGGTTTTTTGCGTTCGCCGTGTCCACCACGTTCTACACGTGCGCCGAAGCCATGCCTGTTTTCCTCCAAGAGCGATACATCTTCATGAGAGAAACCGCCTACAATGCCTACCGTCGATCATCCTACGTTCTCGCCCATTCAATCATCTCAATGCCATCCTTAATTTTCCTCTCCTTTGCCTTCGCCGCCACAACATTCTGGGCGGTGGGCCTATCCGGTGGCGCGTCGGGGTTCTTCTTCTACTTCTTGATCATCGTGGCATCTTTCTGGGCGGGAAACTCCTTCGTGACATTCCTTTCAGGAGTGGTTGCCCACGTGATGCTGGGATTCACGGTTGTGGTCGCCATTATAGCTTACTTCGTGCTGTTCAGTGGTTTCTTCATAAGCAGGGACAGGATTCCTGCATACTGGCTATGGTTTCATTATATATCACTGGTGAAGTACCCATACGAGGGCGTTTTGCAGAACGAGTTCGATATTCGGCCTCCGAGGTGTTTCGTGAGGGGGACTCAGATGTTCGACATGACGCCGTTGGGGCAGGTGCCGGAGACACTGAAGGTGGAGTTGCTGAAGAGTATGAGCAAGACGCTGGGGATGAACATAACGGGGTCGACGTGCGTGACCACGGGACTGGAAATACTGAGGCAGCAGGGGATTACTGACCTCAGCAAGTGGAGTTGCCTCTGGATAACCATTGCATGGGGATTTTTCTTCAGGTTTCTGTTTTATCTGGCTTTGATGTTTGGAAGCAAAAATAAAAGGACCTAA 2289 0.5125 MSQPPPPLSLSPSGDRCTFFNQSMELVQLPYQRSGRAHVSRSPSLADLLKRVGDAQNDTVSQAHQVLDLAPSPSPSYSFILSFTHLTYNIRVRRKMSLSSCFSRKHVDLNSQTPEVHGVAGSESESKTNATKVLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRISKESLKGTITLNGEALDSSLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSRKKARVQALIDQLGLRNAVNTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAYMVVKVLQRIAQTGSIVILSIHQPSYRIVGLLDRLIFLSHGQTVYSGSPANLPRFFSEFGNPIPDNENRTEFALDVIRELEQNPGGTTGLVEFSKSWQSHQMKTKPTNGHETSHINGQKVSLKDAIGASISRGKLVSGAPNNSNNLTISTSVPTFANPFWIEMAVIAKRAMINSRRMPELFGIRLGAVLVTGIILATIFWHVDNSPKGAQERLGFFAFAVSTTFYTCAEAMPVFLQERYIFMRETAYNAYRRSSYVLAHSIISMPSLIFLSFAFAATTFWAVGLSGGASGFFFYFLIIVASFWAGNSFVTFLSGVVAHVMLGFTVVVAIIAYFVLFSGFFISRDRIPAYWLWFHYISLVKYPYEGVLQNEFDIRPPRCFVRGTQMFDMTPLGQVPETLKVELLKSMSKTLGMNITGSTCVTTGLEILRQQGITDLSKWSCLWITIAWGFFFRFLFYLALMFGSKNKRT 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1618 762 FunFam ABC transporter G family member 6 124 350 - -
Acco02g1618 762 SMART AAA_5 144 359 IPR003593 GO:0016887
Acco02g1618 762 Pfam ABC-2 type transporter 316 406 IPR043926 GO:0140359
Acco02g1618 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 349 IPR027417 -
Acco02g1618 762 Gene3D - 123 350 IPR027417 -
Acco02g1618 762 Pfam ABC transporter 135 287 IPR003439 GO:0005524
Acco02g1618 762 Pfam ABC-2 type transporter 459 665 IPR013525 GO:0016020|GO:0140359
Acco02g1618 762 ProSitePatterns ABC transporters family signature. 259 273 IPR017871 GO:0005524|GO:0016887
Acco02g1618 762 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 120 359 IPR003439 GO:0005524
Acco02g1618 762 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 62 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1618 Acco-ChrAcco02 12395759 12398047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1618 134 319 Calmodulin-binding Proteins AT2G36910 29.101 7.05e-11 64.3