Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g1615 | ATGAAGAAACAATTGACAGGTATACGTGACGATAATCCCCTGCAGTCAGCTATCCGGGCAGGAAATGTAGAGTTGGCGCAGCAAATTATTTCTGAGAATGGAGATACAGAATTGAAAGAGTTGCTTTCTAAGCAAAACCACTCTGGTGAAACTGCCCTATACGTTGCTGCTGAAAATGGCCTCGTTGATTTAGTGAAGGAATTGATCCAGTACCATGATATCAGTGTGGCCAGCGTCAAAGCTAGAAATGGTTTCGATGCATTCCATATTGCTGCTAAAAATGGGTTCCTCGAGATATTGATGGTCCTCAAGGAGGCAATTCCAGAACTTTCAATGACTGTTGATCTGTCAAACACTACAGCATTGCATACTGCTGCAGCACAAGGACATATCGATATAGTAAATTTTCTCTTGGACAATGGTAGCAATCTGATCACTATTTCCAAGAGCAACGGGAAAACTGCGATACATTCTGCTGCAAGAAATGGCCATGTGGAGGTTGTCAGGGCCCTTCTGAACAGAGAACCTGAAATTGCCATGAGAATTGATAAGAAGGGTCAGACTGCACTCCACATGGCAGTTAAGGGACAAAATCTTGAGTTGGTAGAAGAGCTTGTGAAATCATTTCCATCCTTGACTAACTCAGTTGATACCAAGGGAAACACTGCACTGCATATTGCTACTCGGAAGGGTCGTTTACAGATTGTTGGGAAGCTATTAGAGAACAGAGGAACAGACACAGATGTCATCAACAAATCTGGAGAAACCCCTCTGGACATTGCCGAGAAGAATGGACGCTCAGACGTTGTCAGCATTCTGCAAGATCATGGAGCTCAGAATGCCAAGTCCATCAAGTCACATTCTGCAAACCCTGCCCTTGAACTCAAACGCACAGTGAGTGACATAAAAAGCGGGGTTCATAACCAGCTAGAGCACACAATCAGAACGCGAAAGCGCATGCAAGGCATTGCGAAAAGACTCAACAAGATGCAGGCTGAAGGGCTTAATAATGCAATCAATTCCAACACTGTCGTTGCTGTTCTTATTGCAACAGTTACTTTTGCTGCCATATTCAACATTCCTGGCCAGTATCCTGATCTCCAAAAGGGGGATGCACTCCCACCTGGAATGTCTCCTGGGGAAGCATATATTGCCCCAAAAATGGGATTTTTGATATTCATCATCTTTGATTCTACTGCCCTCTTCATATCCTTGGCTGTCGTGGTTGTGCAAACATCAGTTGTGGTAATTGAGAGAGAAGCAAAGAAACAAATGACGGCGGTTATAAACAAGTTAATGTGGTTGGCTTGTGTGCTAATATCTGTGGCATTCGTTGCAATGTCATACATAATTGTGGGGAAGCATAAATGGTTGGCTATTTCAGCTGCGGTTTTAGGGACAGTGATCATGGCAGCTACACTAGGAACTCTGTGTTATTGGGTGATTGCTCACCGACTTGAGGCCTCCAGATTGCGAAGTCTTAGGAGGTCAACAATGAGCAGTAGACAGTCTTTGTCTATGTCTATGATGTCAAATTCGGAGAGTGAATACAAGACTGTGTATGCAATATGA | 1572 | 0.4377 | MKKQLTGIRDDNPLQSAIRAGNVELAQQIISENGDTELKELLSKQNHSGETALYVAAENGLVDLVKELIQYHDISVASVKARNGFDAFHIAAKNGFLEILMVLKEAIPELSMTVDLSNTTALHTAAAQGHIDIVNFLLDNGSNLITISKSNGKTAIHSAARNGHVEVVRALLNREPEIAMRIDKKGQTALHMAVKGQNLELVEELVKSFPSLTNSVDTKGNTALHIATRKGRLQIVGKLLENRGTDTDVINKSGETPLDIAEKNGRSDVVSILQDHGAQNAKSIKSHSANPALELKRTVSDIKSGVHNQLEHTIRTRKRMQGIAKRLNKMQAEGLNNAINSNTVVAVLIATVTFAAIFNIPGQYPDLQKGDALPPGMSPGEAYIAPKMGFLIFIIFDSTALFISLAVVVVQTSVVVIEREAKKQMTAVINKLMWLACVLISVAFVAMSYIIVGKHKWLAISAAVLGTVIMAATLGTLCYWVIAHRLEASRLRSLRRSTMSSRQSLSMSMMSNSESEYKTVYAI | 523 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat profile. | 185 | 207 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat region circular profile. | 117 | 144 | - | - | |
| Acco02g1615 | 523 | SMART | ANK_2a | 219 | 249 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | SMART | ANK_2a | 253 | 283 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | SMART | ANK_2a | 117 | 147 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | SMART | ANK_2a | 151 | 180 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | SMART | ANK_2a | 48 | 76 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | SMART | ANK_2a | 83 | 112 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | SMART | ANK_2a | 9 | 38 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | SMART | ANK_2a | 185 | 214 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | SUPERFAMILY | Ankyrin repeat | 13 | 278 | IPR036770 | - | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat region circular profile. | 253 | 279 | - | - | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat region circular profile. | 185 | 207 | - | - | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat profile. | 219 | 252 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | Gene3D | - | 1 | 146 | IPR036770 | - | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat region circular profile. | 48 | 70 | - | - | |
| Acco02g1615 | 523 | Pfam | Domain of unknown function | 333 | 450 | IPR026961 | - | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat profile. | 151 | 183 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | PANTHER | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT | 9 | 504 | - | - | |
| Acco02g1615 | 523 | Pfam | Ankyrin repeats (3 copies) | 10 | 74 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | Pfam | Ankyrin repeats (3 copies) | 151 | 208 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | Pfam | Ankyrin repeats (3 copies) | 216 | 279 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | Pfam | Ankyrin repeats (3 copies) | 83 | 143 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | Gene3D | - | 147 | 325 | IPR036770 | - | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat profile. | 253 | 279 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat region circular profile. | 219 | 252 | - | - | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat region circular profile. | 151 | 178 | - | - | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat profile. | 117 | 149 | IPR002110 | GO:0005515 | |
| Acco02g1615 | 523 | ProSiteProfiles | Ankyrin repeat profile. | 48 | 70 | IPR002110 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco02g1615 | Acco-ChrAcco02 | 12368592 | 12371081 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco02g1615 | 1 | 523 | Miscellaneous Gene Families | AT1G07710 | 63.826 | 0.0 | 620 |