LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco02g1612	ATGACATTTCTATTTTCTAAAGTATCAGTAAAGGCACACAATAAAATTCCACCCCCGGATCATCACCCTGCTGCAAGTAACCTTCCTCCCCAACCCCAACCCCCCAAGACACCTTCCTTGTCCACCACAATGACCACCTCCAACCCGAGCTCAACGCCGGCGATGAGCTTACCTGCATCCAGCATAGACCGCTGCATCGAGGAAGCCCAAGCCTTGATCCACAAGTGGAACTCAGAAACTTCTGCCTACGCTAAAATCACATCCCTATTTTACGATGACAAATCAGAGGCCTTGCACTACATCAAATGCGTCAACCACCTCCACAAGGCAATGCATCTTCTCCACTCCCACCAGAATCCACTCTTCTCAAAAAAGCTCGCTATCGCTAACAACTTGATGCAGATCGCCATGAAGAGGCTTCAAAAGGAGTTCTACCAAATTTTGTCCATCAATCGGGCCTTCTTAGACCCTGAATCACTCTCCACCGTCAGTAGATCCTCCGTCAGCTCCACCATTTCCGATTCCGACATCGAAGATGCTACTGCACCAGAGGACGACGTCCGAGCTGCCGGTGATTCCATCTCTGAACTGGAACAAGTCTCTTGGCTTGCCACCAAGGATCTTAGGTCAATAGCCATGTGTATGATCTCTTGCGGATATGCCAAAGAATGTTTGCATGTCTATAGAACCATTCGGAAATCCATCATCGATGAGGGCATTTACCGGTTGAACTTGGAAAAATTGAAGCCTTCCCAAGTTAATAAGATGGACTGGCAGGTTCTTGATTTGAAAATCAACGTGTGGTTGGAGGCGATGAAGGTTGCGGTGAGGACGCTCTTCAACGGAGAGAGAAAGTTGTGCGATGATGTCTTCGCCTCTTCAGATTCTATTAGGGAGCGTTGCTTCGCCGGCATTTCCAGAGATGGAGCCACTATTCTATTCACATTCCCCCAACACGTCGTCTCCAAAATTAATAAGAACTCGCCGCCGGAGAAAATTTTTCGGCTGCTTGACATGTACAATGTGTTAACTTCTCTGTTGCCGGAGATCCAATCCATCTTCTCTTTCTACTCGACCTCCGAAATTTTAAATCAAGCCAACAATTCTGTGCTCCGGCTCAGCGATTCCGTTCGAAAGAAGCTCTCGGAATTCGAGTCCACGATCCAAAAGGACTCATCCAAGTCGTCGGTAAAATCAGGCGGAATTCACCAGCTAACCGTACAAGCGATGGACTACCTCTCAATCCTCTCGGATTACAGGAACGCGCTCTCCGAGATATTTGCTGACTGGAGTCTACCACCAACATCGCCAGTGCCAGAATATTTACCAGAAAGCCCAGTTTCAGATTCGTCGTCGTCGTCAACGACGCCATTGTTCTCTGCTAGAATAATTTGGCTGATTTTCGTTCTTGTCTGCAAGCTGGACAGCAAAACAAAGCATTGCAAGGATGCTTCGTTGTCGTACCTATTTCTGGCAAACAATATCCGGCACGTGATTGACATGGTGCGAAACTCGAACTTGCAGTCCGTGCTGGGCGACGAGTGGATCAGGAAGCACGAAGCGAAGTTGAAGGGATTCTTGAGTAATTACGAGAAATTGGGGTGGGGCGAAGTGATTACGTGCTTGCCGAGAAATCCAAAGGCGGCGATGACGGCGGAAGAGGCGAGGGTCATATTCAAGAACTTCAACTTCCGTTTTGAGGAGGCATACCGGAAGCAGAATTTATTCACGGTACCGGACAGGAGATTCAGAGAGGAGATCAGAGCATCGGTAGCGAGAAAAATAGTGCCGACGTATGAGGAGTTCTATGGGTCACACAGGACGACTGTGGGATCAATGAGGGAGATGACAATGTATGTAACATTTCACCCTGACGACGTGAAAGGTTATCTAGCCAACTTGTTCTTCGCCGGGACTAACTCCGGCAGCGTAACGACGTCGTCTTCTTCGTCCGTATCTTCGCTCGCGTCATCTCCTCAACGGCAGCATTAG	1992	0.4849	MTFLFSKVSVKAHNKIPPPDHHPAASNLPPQPQPPKTPSLSTTMTTSNPSSTPAMSLPASSIDRCIEEAQALIHKWNSETSAYAKITSLFYDDKSEALHYIKCVNHLHKAMHLLHSHQNPLFSKKLAIANNLMQIAMKRLQKEFYQILSINRAFLDPESLSTVSRSSVSSTISDSDIEDATAPEDDVRAAGDSISELEQVSWLATKDLRSIAMCMISCGYAKECLHVYRTIRKSIIDEGIYRLNLEKLKPSQVNKMDWQVLDLKINVWLEAMKVAVRTLFNGERKLCDDVFASSDSIRERCFAGISRDGATILFTFPQHVVSKINKNSPPEKIFRLLDMYNVLTSLLPEIQSIFSFYSTSEILNQANNSVLRLSDSVRKKLSEFESTIQKDSSKSSVKSGGIHQLTVQAMDYLSILSDYRNALSEIFADWSLPPTSPVPEYLPESPVSDSSSSSTTPLFSARIIWLIFVLVCKLDSKTKHCKDASLSYLFLANNIRHVIDMVRNSNLQSVLGDEWIRKHEAKLKGFLSNYEKLGWGEVITCLPRNPKAAMTAEEARVIFKNFNFRFEEAYRKQNLFTVPDRRFREEIRASVARKIVPTYEEFYGSHRTTVGSMREMTMYVTFHPDDVKGYLANLFFAGTNSGSVTTSSSSSVSSLASSPQRQH	663

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco02g1612	663	Gene3D	Exocyst complex component Exo70	72	642	-	-
	Acco02g1612	663	MobiDBLite	consensus disorder prediction	642	663	-	-
	Acco02g1612	663	Pfam	Exo70 exocyst complex subunit	268	632	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Acco02g1612	663	MobiDBLite	consensus disorder prediction	14	57	-	-
	Acco02g1612	663	SUPERFAMILY	Cullin repeat-like	68	635	IPR016159	-
	Acco02g1612	663	MobiDBLite	consensus disorder prediction	22	37	-	-
	Acco02g1612	663	MobiDBLite	consensus disorder prediction	38	57	-	-
	Acco02g1612	663	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	59	635	IPR004140	GO:0000145\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco02g1612	Acco-ChrAcco02	12352697	12354921	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco02g1612	56	635	EXO70 exocyst subunit family	AT3G09520	48.722	0.0	532