Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1604 ATGACAAGGGGTGACCTGATGAGTGTTAATGGTGATGATAAAAAATTACAAGAATTGACTCAGCATCTACTAGTTGGGAAGAAAATTCTTAAAGATGGGGTTACCAGTGAGGAAAATGGATTGCATGATAAAAATGAGTTGCAAGTTAATGGAATGGTTGAAGAATTTAAGGTTGGACAAGGCGAGACAGTGAAAGGCCCTGTTGTCCAACCTGTAGAAAAGCAACAGACTCAAGGGGAAGAAGTTTGTTGGGAGAGGTTTTTACATCTCAGATCCCTGAAGGTCTTGCTTGTGGAGAATGATAACTGTACTCGCCATGTTGTCTCTGCACTGCTTCGCCATTGTTGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCATGGAAGATGTTGGAGGATGTAACTAATCATATTGATCTCATTTTAACTGAGGTGGCAATGCCTTTCTTATCAGGAATTGGTCTTCTATGCAAGATTATGGGTCACCAAACACGGAAGAACATTCCAGTAATAATGATGTCATCCCATGACTCTATGGATTTAGTCTTTAAGTGCTTTTCAAAGGGTGCTGTTGACTTTCTTGTAAAACCCATACGGAAGAACGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGCAATGCCATAGTTCTAGCGGGAGTGGGAGTGGGAGTGGCTCTCAAACCCAGAAGTCTGTAAAATCAAAGATCCTTGAGAAGTCTGGTGACAACGCTTACAGCAATGACGAGGACAACAACAAAAGTGAAGATCTCAATAATAGGAATGGAAGTGACAATGGCAGTGGAACTCAGACCTCCTGGACCAAATAA 831 0.414 MTRGDLMSVNGDDKKLQELTQHLLVGKKILKDGVTSEENGLHDKNELQVNGMVEEFKVGQGETVKGPVVQPVEKQQTQGEEVCWERFLHLRSLKVLLVENDNCTRHVVSALLRHCCYEVIEAANGLQAWKMLEDVTNHIDLILTEVAMPFLSGIGLLCKIMGHQTRKNIPVIMMSSHDSMDLVFKCFSKGAVDFLVKPIRKNELKNLWQHVWRQCHSSSGSGSGSGSQTQKSVKSKILEKSGDNAYSNDEDNNKSEDLNNRNGSDNGSGTQTSWTK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1604 276 MobiDBLite consensus disorder prediction 218 276 - -
Acco02g1604 276 FunFam Two-component response regulator-like PRR37 93 252 - -
Acco02g1604 276 PANTHER TWO-COMPONENT RESPONSE REGULATOR 93 247 IPR045279 GO:0009736
Acco02g1604 276 Gene3D - 92 256 - -
Acco02g1604 276 SMART REC_2 93 208 IPR001789 GO:0000160
Acco02g1604 276 MobiDBLite consensus disorder prediction 259 276 - -
Acco02g1604 276 ProSiteProfiles Response regulatory domain profile. 94 212 IPR001789 GO:0000160
Acco02g1604 276 MobiDBLite consensus disorder prediction 243 258 - -
Acco02g1604 276 Pfam Response regulator receiver domain 95 206 IPR001789 GO:0000160
Acco02g1604 276 SUPERFAMILY CheY-like 91 215 IPR011006 -
Acco02g1604 276 MobiDBLite consensus disorder prediction 218 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1604 Acco-ChrAcco02 12260472 12264739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1604 82 276 Response Regulator Gene Family AT5G60100 66.332 6.31e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco02g1604 Response_reg 4.1e-21 CL0304