Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1602 ATGGATGTTAAGGAAGCAGAAAGGGTAGTTGTTGCAAAACCAGTACCTTCAAGGCCTACTTGCCCTCCTTTTAGATCCTTCTCCGAGCTACTTGCAGGTGCCATCAATGCCTCTCCATCTACTGAATCTTCTCAAGCTACAGTTTCAGCCATTAGACCAAAGACCGTGAGATTCAAGCCAGCCATGAATCGCCCACCTCCTTCTGGGTTTACTTCTTCCAAGGCTAACCCATCTTACAAAAGTCATAAACCAGACACTAATCAAACAGTTATTTACAAGCCTACGGCTAAGCTTGTCTCCAAGGCCACTGTTTCTCTTTTGGCCAATATGGGAAATTATAGTACCAGTCATAGCCAGCAGTTTCAACATCCCAATCAGGAGAAACTGGGGACCAATTTGAGCTCAATTAATCATCAGAATATTAACACCCCGTGTGCCGAACCAAATCCGGCAATTGAATGTTTCAAGATGGCACATCAGAGCCCAGAGGAGTACCAGAAAAATTCACCATCTACTAGTAATGGTGGTGATAGACCTTGTTATGATGGGTATAACTGGAGGAAATATGGGCAGAAGCAAGTTAAAGGAAGCGAGTATCCGAGGAGTTATTACAAATGCACGCATCCTAATTGCCCAGTGAAGAAGAAGGTTGAAAGATCATTTGATGGGCTGATTGCAGAAATTGTGTATAAAGGGGAACACAACCATTCAAAGCCTCAGCCCCATAAGCGAAACACAGCAGGAACACAAGGATTGGGAGTCGCAGCTGATGGATTGGGTCAAGATACTAATTGTAATAACCATTTATGGGGTAATCCTAACAGTGAGAGGAATGAAAATAGAATGGAGAACCAGAAGGACGCAGGTTATCTTGTCAAAGCTGCAGGAAGTCCTGAGAATTCATATGCTCCAAGTGAGGAATGTGTGGAAGCAAGCAAGGGAAATGAAGTGGAGGAAGATGAACCAAAAAGTAAAAGAAGGAAAAACAAGAATCAATCCAATGAAGCAGCAGTAGCAGAAGAAGGTTTAGTGGAGCCTCAAGTGGTGGTTAAGAGTTCTACAGATTCTGAAGTACTGGGAGACGGCTTTCGCTGGAGGAAATATGGCCAGAAGGTGGTGAAGGGCAATCCATATCCCAGAAGTTATTATAGATGCACTAACATAAAGTGCAGCGCCCGGAAACATGTGGAAAGATCAATGGATGACCCAAAAGCATTTATCACTACATATGAAGGGAAACACAACCATGAGATGCCACGCAAAACTATAGGTGCTGTGGCCTCTGAAAAAGTCAAGCCATGA 1302 0.4363 MDVKEAERVVVAKPVPSRPTCPPFRSFSELLAGAINASPSTESSQATVSAIRPKTVRFKPAMNRPPPSGFTSSKANPSYKSHKPDTNQTVIYKPTAKLVSKATVSLLANMGNYSTSHSQQFQHPNQEKLGTNLSSINHQNINTPCAEPNPAIECFKMAHQSPEEYQKNSPSTSNGGDRPCYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGLIAEIVYKGEHNHSKPQPHKRNTAGTQGLGVAADGLGQDTNCNNHLWGNPNSERNENRMENQKDAGYLVKAAGSPENSYAPSEECVEASKGNEVEEDEPKSKRRKNKNQSNEAAVAEEGLVEPQVVVKSSTDSEVLGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCSARKHVERSMDDPKAFITTYEGKHNHEMPRKTIGAVASEKVKP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1602 433 FunFam WRKY transcription factor 347 420 - -
Acco02g1602 433 ProSiteProfiles WRKY domain profile. 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g1602 433 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g1602 433 SMART WRKY_cls 359 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g1602 433 MobiDBLite consensus disorder prediction 296 340 - -
Acco02g1602 433 FunFam WRKY transcription factor 166 240 - -
Acco02g1602 433 SUPERFAMILY WRKY DNA-binding domain 354 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g1602 433 MobiDBLite consensus disorder prediction 162 178 - -
Acco02g1602 433 MobiDBLite consensus disorder prediction 37 51 - -
Acco02g1602 433 MobiDBLite consensus disorder prediction 232 252 - -
Acco02g1602 433 ProSiteProfiles WRKY domain profile. 354 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g1602 433 MobiDBLite consensus disorder prediction 311 334 - -
Acco02g1602 433 SUPERFAMILY WRKY DNA-binding domain 179 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g1602 433 MobiDBLite consensus disorder prediction 160 179 - -
Acco02g1602 433 Pfam WRKY DNA -binding domain 361 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g1602 433 Pfam WRKY DNA -binding domain 182 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g1602 433 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 102 421 IPR044810 GO:0003700
Acco02g1602 433 Gene3D WRKY domain 169 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g1602 433 Gene3D WRKY domain 344 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g1602 433 MobiDBLite consensus disorder prediction 66 86 - -
Acco02g1602 433 MobiDBLite consensus disorder prediction 37 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1602 Acco-ChrAcco02 12240698 12242662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1602 361 433 WRKY Transcription Factor Family AT2G37260 47.436 5.18e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco02g1602 WRKY 1e-25 CL0274