Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1595 ATGCCGCCGAAGCAGCAATCGAAAGCTGATTTAGCAAAGAAGCAGAAGATCGTTGAGGATAAAACTTTTGGTCTAAAAAACAAGAACAAGAGCAAAAATGTCCAGAAATACGTTCAGAACCTCAAGCAGTCCGTGCAGCCGAAAACTGATCCTTCCAAAACCGCCGCCAAGAAAAAGAAGGAGGAGGACAAGGCCAAGGAGAAGGAGTTAAACGAGCTCTTCAAAATTGCTATTACCCAGCCTAAAGTGCCAGTTGGTGTTGATCCCAAGTCCATAGTATGTGAGTTTTTTAAAGCAGGACAGTGTACCAAGGGCTTTAAATGCAAGTTCTCACATGATTTGAATGTTCAGAGGAAAGGGGAAAAGATTGACATTTACAGTGACAAGCGCGACGAGGAAACGATGGAGGATTGGGATCAAGAGACCTTGGAGAAGGTGGTGGAGTCCAAGAAAAACGAGTATCAACAGAATAAACCAACTGACATAGTCTGTAAACATTTTTTGGATGCAGTGGAGAAGAAGCAATATGGCTGGTTTTGGGTCTGCCCAAATGGTGGTAAGAATTGCCACTATAGACATGCCCTTCCCCCTGGATATATTTTAAAATCTCAAATGAAGGCCCTGTTGGAGGAAGAAGCTGAAAAGATGCCAATTGAGGAGGAGATTGAAGATCAGCGCTCCAAATTGAAATCAACTACGCCTATGACTCCTGAGTTATTCATGCAATGGAAGAAGAAGAAGATTGTAGAAAGAGATGCCAATTTGGCTGAACAACAGGCAGAGAGAGCTAAAAATGATCGCATGAGTGGTCGTGAGCTATTTTTGTCCAATGCTAGCTTTTTTGTGGATGATATCGACGCATATGACAAGTATCAAAGAGAGCCAGAATCTGATGATAATGAGCAGCAGCCGCAGGCAAATGGTGATGCTGGTGATGGTCCAAGCCCCTCAACAGCAACCAATGCTGATGCTGAAGAAGCTAATGGTGAAGCGATTGATGTAGATGACGATGACGAGCTAGACATGGATGAATTGAATGAATTGGAAGCAAGTTTATCGAAGACATCAATCCAAATAAAGGAGCCTGGAGCTGAAGCTTAA 1101 0.4314 MPPKQQSKADLAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQSVQPKTDPSKTAAKKKKEEDKAKEKELNELFKIAITQPKVPVGVDPKSIVCEFFKAGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDEETMEDWDQETLEKVVESKKNEYQQNKPTDIVCKHFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYILKSQMKALLEEEAEKMPIEEEIEDQRSKLKSTTPMTPELFMQWKKKKIVERDANLAEQQAERAKNDRMSGRELFLSNASFFVDDIDAYDKYQREPESDDNEQQPQANGDAGDGPSPSTATNADAEEANGEAIDVDDDDELDMDELNELEASLSKTSIQIKEPGAEA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1595 366 Gene3D - 202 279 - -
Acco02g1595 366 MobiDBLite consensus disorder prediction 40 64 - -
Acco02g1595 366 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Acco02g1595 366 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Acco02g1595 366 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Acco02g1595 366 MobiDBLite consensus disorder prediction 292 338 - -
Acco02g1595 366 Coils Coil 246 266 - -
Acco02g1595 366 Gene3D - 87 199 - -
Acco02g1595 366 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 364 - -
Acco02g1595 366 MobiDBLite consensus disorder prediction 301 324 - -
Acco02g1595 366 Pfam DRG Family Regulatory Proteins, Tma46 216 296 IPR032378 -
Acco02g1595 366 SUPERFAMILY CCCH zinc finger 89 113 IPR036855 GO:0046872
Acco02g1595 366 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Acco02g1595 DFRP_C 3e-17 No_clan