Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1592 ATGCAGCATATTATACATTTTCTCTCCTGGCAAAACCCTAACGGCACATTCCGGCGGTGCCACTCTTCCACATCAGCCATGGCCGCCGCAGCTCGCCCACTCGTCACTGTCCAATTTCTCGAGGGCTACATGGCCACTGATGCTGCCCCAACTGTTCATCTTCCTGATGTCATGAAGGCCTCCATTCGCCCCGACATTGTCAACTTCGTCCACGCTCATATTTCTAAGAATAGTCGCCAACCCTACGCCGTCAGCAAGCATGCCGGTCACCAGACCTCTGCCGAATCATGGGGTACTGGCCGTGCTGTGTCTCGTATTCCCCGTGTCTCTGGCAGCGGTACCCACCGTGCTGGTCAGGGTGCTTTTGGTAATATGTGTCGTGGTGGTCGTATGTTCGCTCCTACCAAGATTTGGCGCCGCTGGCACCGTAAGATCAACGTCAATCAGAAGCGTTACGCCGTCGTTTCAGCCGTTGCTGCCTCGGCAATTCCATCCATTGTTATGGCCCGTGGCCACAGAATTGAGTCTGTGCCGGAAATGCCTCTTGTCGTCAGCGATTCAGCTGAGGGTGTTGAGAAGACTAAGGACGCTATCAAGGTGCTGAAGCAGGTTGGCGCTTTTCCTGATGCTGAGAAAGCAAAGGATAGCCACTCAATCCGACCTGGTAAGGGTAAAATGAGAAATCGCCGATACATCTCTCGCAAGGGTCCTTTGATTGTGTATGGAACTGAAGGAGCCAAAGCTGTGAAAGCTTTTAGAAACATTCCAGGGGTCGAGGTTGCTAATGTCGAGAGGCTGAACCTTCTCAAGTTGGCTCCTGGTGGTCATCTGGGTAGGTTTGTTATTTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCGATTTATGGGTCATTCGATAAGCCTTCAGAGAAAAAGAAAGGTTACTTTCTTCCAAGGGCCAAGATGGTTAATAGTGACTTGGCTAGGATTATCAACTCTGATGAGATTCAATCCGTGGTGAGACCCATCAAGAGGGAAATTAAGAGGGCGCCGCTCAAGAAGAATGCGCTTAAGAACCAGAATACTATGTTTAAACTGAACCCATATTATAAGACTGCCAAGAGAAATGCTCTTCTTGCTGAGGCTCAACGGGTCAAAGCAAAGAAAGAGAAACTTGAGAAGAAGAGGAGTTCTCTCTCTAAGGAGGAGGCTTCTGCTATTAAGGCTGCAGGAAAAGCGTGGTATCAAACCATGGTGTCGGACTCCAATTATGCAGAATTTGAGAACTTTTCGAAGTGGTTGGGTGTTTCACAGTGA 1296 0.4923 MQHIIHFLSWQNPNGTFRRCHSSTSAMAAAARPLVTVQFLEGYMATDAAPTVHLPDVMKASIRPDIVNFVHAHISKNSRQPYAVSKHAGHQTSAESWGTGRAVSRIPRVSGSGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAVAASAIPSIVMARGHRIESVPEMPLVVSDSAEGVEKTKDAIKVLKQVGAFPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYFLPRAKMVNSDLARIINSDEIQSVVRPIKREIKRAPLKKNALKNQNTMFKLNPYYKTAKRNALLAEAQRVKAKKEKLEKKRSSLSKEEASAIKAAGKAWYQTMVSDSNYAEFENFSKWLGVSQ 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1592 431 PANTHER 60S RIBOSOMAL PROTEIN L4 30 424 IPR045240 -
Acco02g1592 431 FunFam 60S ribosomal protein L4 29 334 - -
Acco02g1592 431 Pfam Ribosomal protein L4/L1 family 53 292 IPR002136 GO:0003735|GO:0005840|GO:0006412
Acco02g1592 431 MobiDBLite consensus disorder prediction 81 100 - -
Acco02g1592 431 SUPERFAMILY Ribosomal protein L4 48 293 IPR023574 GO:0003735|GO:0005840|GO:0006412
Acco02g1592 431 Gene3D - 29 334 IPR023574 GO:0003735|GO:0005840|GO:0006412
Acco02g1592 431 Pfam 60S ribosomal protein L4 C-terminal domain 306 378 IPR025755 -
Acco02g1592 431 MobiDBLite consensus disorder prediction 81 99 - -
Acco02g1592 431 Coils Coil 363 402 - -
Acco02g1592 431 ProSitePatterns Ribosomal protein L1e signature. 146 172 IPR013000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1592 Acco-ChrAcco02 12179003 12181995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1592 28 431 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 80.941 0.0 662