Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1590 ATGCTGGATCTTAATCTCAACGTCGTTTCATTTGATTCCGCGTCGAATTCCGTTGACGTGCCTGCTGAGAATGTTGTGCTACATTCTGGTAGCCCAATGGATAGCTCTGGAAGCTTCAATTCTTCCATCATCACCAATACTTTTGATGAAGACTCTTGCTCTTATGGCGATGCCTTTGCTAACAACTTCGGAACAGTGAGCAAGAATAACATAAATGATGGCACAAGCTACAAAGCAATTGATCTTCTAGTAGGTGAAGGTGAAGATGTCTGTGATCGGACCATCCAGCTTTTTCCGATCGCCGGTGCCGAAGAAGGTCGGGTCTCTGAATTGAGGGTCGGTCAGCGATTTCCAGGTTCGTCTTCAAGTAAGGGATGGTTGAATTTCCTGTGTCAGGAGGTAGGTCCCGGTGGAACGCTGGAACAGAGGATGCCTCCGCCGCAGCAGCAGAGACCGCAGGTCAAGAAGAGTCGGCGGGGACCGAGGTCGCGGAGCTCACAGTATCGTGGTGTTACATTTTATCGAAGAACTGGAAGATGGGAATCACATATATGGGATTGTGGGAAACAGGTGTACTTGGGCGGATTTGATACAGCACATGCTGCGGCAAGGGCATATGATCGAGCCGCAATCAAGTTCCGTGGCCTTGATGCTGATATTAATTTCATTGTTAGTGATTATGCAGAGGAGATAAAGCAGATGGGTAATTTCACAAAGGAAGAGTTTGTGCATATTCTGCGGCGACAGAGCACTGGCTTTTCAAGGGGAAGCTCTAAATATAGAGGAGTTACTCTGCATAAATGTGGGCGATGGGAAGCTCGCATGGGGCAGTTTCTAGGGAAGAAGTATATATATCTTGGGCTATTTGATAGCGAAATAGAGGCTGCAAGGGCGTATGATAAAGCAGCTATAAAATGCAATGGGAAGGAAGCAATGACAAACTTTGAGCCAAGCTCATACGAAGGGGGGATAATCTCTCAGGCAGATAATGAAGATGGCAATCCAAATCTTGATCTTAGCCTGGCCATTGCTCCCCTTGCTTACACTGATGGTTTTCAAGTCCAGCATGGCTGGGCCGATCTTCCTGTTGATGGGAGAGTTGCGTTCGAGAACTCTGCATCAAGGTTTATGAAGGGTCAACCGTCTCACGCTTTCCCGATTGCGCCCCAGCATCCTTCTGCCTGGAATAGTACTGATTTCTTTCCCATCAATCAGGGAAGAGCAATGGAAGCTAATTCCCTGCCAAACTGGGTATTTCAATACCAAGCTCCCTATGGCGAGGCGTCTTTGATTCCATCCTTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACAAGCAAAGAACTAGAACTTTTAGCATTTCCTACTTCTCCAGCATTCATATTCGGCCTGTTTAAGTTCAAAATGGATGAAACAAAGTTGTTTGTTGATGTTTAG 1437 0.4662 MLDLNLNVVSFDSASNSVDVPAENVVLHSGSPMDSSGSFNSSIITNTFDEDSCSYGDAFANNFGTVSKNNINDGTSYKAIDLLVGEGEDVCDRTIQLFPIAGAEEGRVSELRVGQRFPGSSSSKGWLNFLCQEVGPGGTLEQRMPPPQQQRPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFIVSDYAEEIKQMGNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGKEAMTNFEPSSYEGGIISQADNEDGNPNLDLSLAIAPLAYTDGFQVQHGWADLPVDGRVAFENSASRFMKGQPSHAFPIAPQHPSAWNSTDFFPINQGRAMEANSLPNWVFQYQAPYGEASLIPSFSAAASSGFPSTSKELELLAFPTSPAFIFGLFKFKMDETKLFVDV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1590 478 Pfam AP2 domain 167 215 IPR001471 GO:0003700|GO:0006355
Acco02g1590 478 Pfam AP2 domain 258 307 IPR001471 GO:0003700|GO:0006355
Acco02g1590 478 ProSiteProfiles AP2/ERF domain profile. 259 316 IPR001471 GO:0003700|GO:0006355
Acco02g1590 478 SUPERFAMILY DNA-binding domain 166 224 IPR016177 GO:0003677
Acco02g1590 478 CDD AP2 258 318 IPR001471 GO:0003700|GO:0006355
Acco02g1590 478 ProSiteProfiles AP2/ERF domain profile. 167 223 IPR001471 GO:0003700|GO:0006355
Acco02g1590 478 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 139 339 - -
Acco02g1590 478 CDD AP2 167 222 IPR001471 GO:0003700|GO:0006355
Acco02g1590 478 SMART rav1_2 167 229 IPR001471 GO:0003700|GO:0006355
Acco02g1590 478 SMART rav1_2 259 322 IPR001471 GO:0003700|GO:0006355
Acco02g1590 478 MobiDBLite consensus disorder prediction 137 168 - -
Acco02g1590 478 SUPERFAMILY DNA-binding domain 258 317 IPR016177 GO:0003677
Acco02g1590 478 PRINTS Ethylene responsive element binding protein signature 298 318 IPR001471 GO:0003700|GO:0006355
Acco02g1590 478 PRINTS Ethylene responsive element binding protein signature 260 271 IPR001471 GO:0003700|GO:0006355
Acco02g1590 478 FunFam AP2-like ethylene-responsive transcription factor 166 225 - -
Acco02g1590 478 Gene3D AP2/ERF domain 258 317 IPR036955 GO:0003700|GO:0006355
Acco02g1590 478 Gene3D AP2/ERF domain 166 224 IPR036955 GO:0003700|GO:0006355
Acco02g1590 478 FunFam AP2-like ethylene-responsive transcription factor 258 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1590 Acco-ChrAcco02 12171653 12174587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1590 154 341 AP2-EREBP Transcription Factor Family AT4G36920 79.897 1.23e-90 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco02g1590 AP2 1.3e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1590 02 12171653 12174587 Acco02g1590 02 12171653 12174587 ECH