Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1582 ATGTGCCCAGGAACCACGTGGTCGAATCATCTGCCCAGCCGTGATCTTCAGCACAGAGCCCCGAAGGTGGAGAGAGATAGTAACAAAATCTCCAAAGCGAAAAAGAAGGGAGAAAAAGAAAGGATTCCTGCAACGATGGCCGAAGGTCCGGCCAGTCCCGGCGCGGGTGGTAGCCACGAGGAGAGCGGTGATCAGAGCCCCCGCTCTAATGTCCGAGAGCAAGACAGGTTCTTGCCCATCGCCAATGTCAGCCGAATCATGAAGAAGGGACTTCCTCCCAATGGAAAAATTGCCAAGGATGCCAAGGAGACCGTGCAAGAATGCGTTTCCGAGTTCATCAGCTTTATCACCAGCGAGGCGAGTGATAAGTGTCAGAGGGAAAAGAGGAAGACGATTAACGGCGATGATTTACTTTGGGCGATGGCAACTTTAGGGTTCGAAGATTACATCGATCCCTTGAAGATTTATCTGAGCAGATACAGGGAGATGGAGGGTTCGGTCAAGGGCGGAGAAGTATCTGCTAAGAAAGATGTTCAATCAAGTCCCAATGCTCAGTTCGCTCATCAAGGTTCTTTCTCCCAAGTTGTTAACTATACAAATTCTCAGTTAATTGTTTTGTACTTTCCAGATGAGCCAGAGATACTATCGGCTCGTGTTGCACTGAATGTGCTGAATGGGAGCTTGTTGGTTTTAGTTGGTCTCATAAAATGA 711 0.4852 MCPGTTWSNHLPSRDLQHRAPKVERDSNKISKAKKKGEKERIPATMAEGPASPGAGGSHEESGDQSPRSNVREQDRFLPIANVSRIMKKGLPPNGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREMEGSVKGGEVSAKKDVQSSPNAQFAHQGSFSQVVNYTNSQLIVLYFPDEPEILSARVALNVLNGSLLVLVGLIK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1582 236 PRINTS CCAAT-binding transcription factor subunit A signature 124 142 - -
Acco02g1582 236 PRINTS CCAAT-binding transcription factor subunit A signature 143 161 - -
Acco02g1582 236 PRINTS CCAAT-binding transcription factor subunit A signature 105 123 - -
Acco02g1582 236 FunFam Nuclear transcription factor Y subunit B-3 66 191 - -
Acco02g1582 236 MobiDBLite consensus disorder prediction 1 77 - -
Acco02g1582 236 MobiDBLite consensus disorder prediction 15 43 - -
Acco02g1582 236 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 77 141 IPR003958 -
Acco02g1582 236 SUPERFAMILY Histone-fold 74 180 IPR009072 GO:0046982
Acco02g1582 236 ProSitePatterns NF-YB/HAP3 subunit signature. 108 124 IPR003956 GO:0005634|GO:0006355|GO:0043565
Acco02g1582 236 Gene3D Histone, subunit A 64 197 IPR009072 GO:0046982
Acco02g1582 236 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 57 186 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1582 Acco-ChrAcco02 12109878 12111615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1582 46 202 CCAAT-HAP3 Transcription Factor Family AT2G37060 75.904 2.75e-81 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco02g1582 CBFD_NFYB_HMF 3e-27 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1582 02 12109878 12111615 Acco02g1582 02 12109878 12111615 ECH