Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1573 ATGAACGTTGTGACTTCTTCTTCGATCAAATCGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAGTTGGTTTTCTACTGTGAAGAAAGCTTTCAGCCCAGAGTCAAAGAAAAAGGAAGATCAGAAATCAAGCAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGGAGATCTCAGATTCATACGTGGGTTCGGAGAAAACAGAACATCCCCCTGTTCCTCCACCTGAAGAAATTAAATCATATAATCTTGAGAATGAAGCCAGCCAAAGCCTTGTTCATGAAGTTGCAACTGCTGTGGAAGCTGAGAGACCAATCCCTGCCATTCAGACACCAGTTGTTGCAATACAAGCCCCTAAAATCTCTCGGTTTGCCGGTAAATCAAGGGAAGAGGTTGCTGCAATAAAGATTCAGACAGCTTTTAGGGGCTATCTGGCAAGAAGAGCTTTGCGAGCTCTAAGAGGGCTAGTCAGATTGAGGACACTAATGGAAGGGCCGATTGTAAAACGCCAAGCCACTAGCACTCTTCGTTCTATGCAAGCTTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGGAGGATCAGGATGTTCGAGGAGAATCAGGCTCTGCAAAGACAACTCTTACACAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGAAGAGGAATGGGATGATAGCCTGCAATCCAAAGAACAAATTGAAGCCAGGTTACTACAAAAGTATGAGGCAGCCATGAGAAGAGAAAAGGCTCTGGCATATGCATTCACTCATCAGCAAACATGGAAGAATTCAGCCAAATCAATAAACCCAATGTTCATGGATCCAACAAATCCTTCATGGGGCTGGGGCTGGCTGGAACGGTGGATGGCAGCTCGGACATGGGAGAGCCGAAGCACAATGGAGAAAGAAATGAACGATGACCGTTCATCTGTGAGAAGTTGTAGCCGCAGCGTCACCGGCGGCGGAGAAATCAGCAAATCATATGCCCGTTCCCAACTCAATTCAGAAAAGCAATCTCCCACAGCAAGCCAAATCAACGACTCACCTAGCTTCAGATCATACTCAACTCCTTCAAAGACAGCTTCCAGAAAATTCAAGAAGGCTAGCCCAAAGAACAGTTTTGTAATGGATGATGATGTTAGAAGTTCGGCCAGTGCGCAGTCAGGGAGGTTCCGGCGGCATTCCATCGGTGGCGCGTCGGTTAGAGACGACGAGAGCCTTGCGAGCTCGCCGGCGGTTCCGAGTTACATGGTGGCGACTCAGTCTGCAAAAGCTAAGTCTAGGACGCAGAGTCCATTGGCAACTGAGAATGGCACGCCACAGAAGGAGAGAGATAGAGGGTCTTTCGGGACCGCAAAGAAACGGCTTTCTTACCCGGCGTCGCCAGCGAGGCCACGGCGGCATTCGAGTGGGCCACCGAAGATAGAAAACAACTTAAATGCAGAAATCGCAATGGATAATGGTGGGGCTGCTTAA 1479 0.4794 MNVVTSSSIKSRNAKKMGRKGSWFSTVKKAFSPESKKKEDQKSSKSKKKWFGKQKLEISDSYVGSEKTEHPPVPPPEEIKSYNLENEASQSLVHEVATAVEAERPIPAIQTPVVAIQAPKISRFAGKSREEVAAIKIQTAFRGYLARRALRALRGLVRLRTLMEGPIVKRQATSTLRSMQALARVQSQIRSRRIRMFEENQALQRQLLHKHAKELESMRIEEEWDDSLQSKEQIEARLLQKYEAAMRREKALAYAFTHQQTWKNSAKSINPMFMDPTNPSWGWGWLERWMAARTWESRSTMEKEMNDDRSSVRSCSRSVTGGGEISKSYARSQLNSEKQSPTASQINDSPSFRSYSTPSKTASRKFKKASPKNSFVMDDDVRSSASAQSGRFRRHSIGGASVRDDESLASSPAVPSYMVATQSAKAKSRTQSPLATENGTPQKERDRGSFGTAKKRLSYPASPARPRRHSSGPPKIENNLNAEIAMDNGGAA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1573 492 SMART iq_5 129 151 IPR000048 GO:0005515
Acco02g1573 492 PANTHER IQ-DOMAIN 5-RELATED 17 462 - -
Acco02g1573 492 MobiDBLite consensus disorder prediction 377 391 - -
Acco02g1573 492 MobiDBLite consensus disorder prediction 31 52 - -
Acco02g1573 492 MobiDBLite consensus disorder prediction 1 52 - -
Acco02g1573 492 MobiDBLite consensus disorder prediction 301 492 - -
Acco02g1573 492 Pfam IQ calmodulin-binding motif 133 151 IPR000048 GO:0005515
Acco02g1573 492 Pfam Protein of unknown function (DUF4005) 397 477 IPR025064 -
Acco02g1573 492 Gene3D iswi atpase 127 165 - -
Acco02g1573 492 MobiDBLite consensus disorder prediction 312 364 - -
Acco02g1573 492 ProSiteProfiles IQ motif profile. 130 158 IPR000048 GO:0005515
Acco02g1573 492 MobiDBLite consensus disorder prediction 414 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1573 Acco-ChrAcco02 12038511 12041345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1573 17 492 IQD Protein Family AT5G03040 49.597 6.78e-139 406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1573 02 12038511 12041345 Acco06g0758 06 5005837 5008314 CCT
Acco02g1573 02 12038511 12041345 Acco02g1573 02 12038511 12041345 ECH