Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1562 ATGTTGTTACTTCACTGTCTATTCTCAACCATCGTCTTTATCGCCTTTGCATTGTTTCTCTGCTTAACCAGCTGCGTCTTCTCAATCGTCGCCACTGAATTCGACTTTGGCACCTTAACTTTAAGCAGTCTCACGCTTCTCGGAGACGCTCACCTGGACAATGACAGTGTCAGGCTCACCAGAGACCTCGCCGTCCCCACCTCTGGTGCCGGCAGAGCTCTCTACTCTAAACCCATCAGATTCAGGCAACCTGGCACTCACTCGCCGGCGAGTTTTAACACCTTTTTCTCCTTTTCAATTACCAATCTGAATCCATCCTCCATTGGAGGGGGGCTCGCTTTTCTAATCACACCGGATGCCGAGACCATCGGAGACGCCGGTAGCTTTCTTGGCCTCCTTAAAGGGGACGGCTCCTCATCGGGTTTTCTGGCGGTGGAATTTGACACTCTGATGGATGTAGAGTTCAAGGACATTAACGGAAATCATGTGGGTCTGGACCTGAATAGTATGGTTTCGACTCATGCTGGTGACTTGGATTCTGTTGGGATCGATCTAAAAAGTGGCGATCTCGTGAACGCATGGATCGAATTCAACGGCTCCACAAAGGGATTTAACATCTGGGTTTCGTACTCAAATCTAAGACCAAAAGATCCCTTACTCTCATTCGATCTTGATCTGGATCAGTACGTTAATGACTTGATGTATGTGGGTTTCTCTGGCTCTACGCAGGGTAGTACAGAGGTCCACAGCTTACAGTGGTGGAGCTTCAGCTCTTCGTTCGACTCCAATTCTCCTTCTGGATCAGGTTCATCGGCTCCGCCGCCACCTCCGACTCTAAGTACGATGAACTCGACCGCCAGTTCCGTGAAGTCACCTCCTCCTTCATTGGCTCCCGCAGCTTCAAATACTCAACCGGAGGATACTAAATTGTCCTGCCACAATGAGCTCTGTAAGCAAAATCCTGGGGCCGTTGCGGGGGTTGTGACGGCAGGAGCTTTCGTTTTAGCTTTACTCGCCGGTGCATTCATTTGGGTGTACTCTAAAAAGGTCAAACACGTTAAGAAGTCTGAGTCACTTGCCTCAGAAATCATCAAAATGCCTAAAGAATTTAGTTACAAGGATATCAAATCAGCCACCAAGTGCTTCAATGCCAATAGAATAATCGGTCACGGCGCTTTTGGGACTGTGTATAAGGGAATACTGCCGGAGAACGGTGATATCATTGCGGTGAAGAGATGCAGCCATAGCAGTCAAGGGAAGAACGAATTGTTATCTGAATTATCCATAATTGGGTCTCTCAGACATAGAAATCTCGTTCGTCTTCAAGGATGGTGCCACGAGAAAGGTGAAATCTTACTAGTCTATGACTTAATGCCCAATGGGAGTCTAGATAAAGCGTTATTCGAAGCCCGAACACCCCTACCATGGCCTCACAGGCTTAAAATTTTGTTAGGCGTTGCCTCAGCCCTCGCTTATTTGCATCAAGAGTGCGAAAACCAGGTAATTCACAGAGACGTCAAGACAAGTAACATAATGTTAGACGAAGGCTTCAATGCCCGGTTGGGCGATTTTGGTTTAGCTCGCCAAACAGAACACGACAAGTCGCCGGATGCCACGGTGGCGGCGGGAACAATGGGTTATCTGGCACCGGAGTATCTCCTCACAGGTAGAGCCACAGAGAAAACTGACATATTTAGTTACGGTGCGGTGGTTCTTGAAGTGGCCTGTGGAAGAAGACCCATAGAGAAAGATGCTAACGGTAAAGTAGGAGCAAGTAGTAACTTAGTAGAATGGGTATGGAGCTTGCACAGAGAAGGGAGGTTGCTAATGGCCGCTGATGCGAGGCTTTGCGGTGAGTTTGACGAAGCAGAAATGAGGAGGGTGCTATTAGTCGGGTTGGCTTGTTCTCAACCCGACCCGTTTAACAGGCCCACGATGAGGGCCGTGGTTCAGATGTTGGTGGGTGAAGCCGATGTCCCGACTGTTCCAAGGGCGAAACCATCCACTAGTTACAGCACATCGCACCTCTTAATGAACCTGCAGGACAGCGTCTCTGACTATAATGGCATAATCGCCGTCACTACCTCGTCGTCGTCAGACAACAGCTTTAACATAGGAGATGTCGTCTGA 2130 0.4873 MLLLHCLFSTIVFIAFALFLCLTSCVFSIVATEFDFGTLTLSSLTLLGDAHLDNDSVRLTRDLAVPTSGAGRALYSKPIRFRQPGTHSPASFNTFFSFSITNLNPSSIGGGLAFLITPDAETIGDAGSFLGLLKGDGSSSGFLAVEFDTLMDVEFKDINGNHVGLDLNSMVSTHAGDLDSVGIDLKSGDLVNAWIEFNGSTKGFNIWVSYSNLRPKDPLLSFDLDLDQYVNDLMYVGFSGSTQGSTEVHSLQWWSFSSSFDSNSPSGSGSSAPPPPPTLSTMNSTASSVKSPPPSLAPAASNTQPEDTKLSCHNELCKQNPGAVAGVVTAGAFVLALLAGAFIWVYSKKVKHVKKSESLASEIIKMPKEFSYKDIKSATKCFNANRIIGHGAFGTVYKGILPENGDIIAVKRCSHSSQGKNELLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRLKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDIFSYGAVVLEVACGRRPIEKDANGKVGASSNLVEWVWSLHREGRLLMAADARLCGEFDEAEMRRVLLVGLACSQPDPFNRPTMRAVVQMLVGEADVPTVPRAKPSTSYSTSHLLMNLQDSVSDYNGIIAVTTSSSSDNSFNIGDVV 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1562 709 Pfam Legume lectin domain 32 263 IPR001220 GO:0030246
Acco02g1562 709 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 263 IPR013320 -
Acco02g1562 709 Pfam Protein kinase domain 383 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1562 709 FunFam L-type lectin-domain containing receptor kinase VIII.1 346 457 - -
Acco02g1562 709 FunFam L-type lectin-domain containing receptor kinase VIII.1 30 270 - -
Acco02g1562 709 MobiDBLite consensus disorder prediction 281 307 - -
Acco02g1562 709 FunFam L-type lectin-domain containing receptor kinase VIII.1 458 671 - -
Acco02g1562 709 ProSitePatterns Protein kinases ATP-binding region signature. 388 411 IPR017441 GO:0005524
Acco02g1562 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Acco02g1562 709 ProSiteProfiles Protein kinase domain profile. 382 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1562 709 Gene3D Phosphorylase Kinase; domain 1 344 457 - -
Acco02g1562 709 Gene3D Transferase(Phosphotransferase) domain 1 458 661 - -
Acco02g1562 709 CDD STKc_IRAK 388 653 - -
Acco02g1562 709 SMART serkin_6 382 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1562 709 PANTHER - 56 663 - -
Acco02g1562 709 CDD lectin_legume_LecRK_Arcelin_ConA 48 254 IPR001220 GO:0030246
Acco02g1562 709 MobiDBLite consensus disorder prediction 264 307 - -
Acco02g1562 709 SUPERFAMILY Protein kinase-like (PK-like) 364 687 IPR011009 -
Acco02g1562 709 Gene3D - 30 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1562 Acco-ChrAcco02 11942732 11944861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1562 12 690 Receptor kinase-like Gene Family AT3G53380 69.942 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco02g1562 Pkinase 1.9e-49 CL0016