Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1553 ATGAGCGTCATCGACATTCTAACTAGAGTTGATTCGATCTGCAAGAAGTACGACAAATACGACGTCGACAACCACAAGGATTCCAATATCTCCGGCGACGATGCATTTGCTCGACTCTACGCTGTAGTCGAAGCTGACATTGAGGCAGCTCTTGAGAAATCAGAAACTGCTTCGAAGGAGAAAAGTAGGGCATCTGTTGTGGCCATCAATGCTGAGATTCGTCGTACTAAGGCTCGGTTGCTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCTGTAAAGAAGGTAAAAGGACTTTCATCAGAAGAATTTGCTGCTCGTAACGACTTGGTTCTTGCACTGCCAGAGAGGATCCAAGCTATCCCAGATGGGACCCCTGCTGCACCCAAAAAAACAGGTGGTTGGGCTTCTTCTGCTTCCCGTACTGAAATTAGGTTTGATTCAGATGGTCAATTTGACGATGAATACTTCCAACAAACTGAGGAATCAAGTAAATTTCAGCAAGAGTTTGAAATGCGCAAAATGAAGCAGGCAAGTCATATTGGCCCGGGGGATCAAGGTTTGGATATGATTGCAGAAGGCTTGGATAAATTGAAAGACATGGCACACAATATGAATGAGGAACTAGATAGACAAGTTCCTCTGATGGATGAGATTGACGCTAAGGTGGACAAAGCATCATCTGACCTAAAGAATACCAATGTCAGGCTTAAAGACACAGTGACCCAGCTTCGATCCAGTCGAAATTTCTGTATTGACATTGTGCTGTTGATTATAATTTTGGGAATTGCTGCCTATTTATACAATGTACTGAGGAAATGA 819 0.4396 MSVIDILTRVDSICKKYDKYDVDNHKDSNISGDDAFARLYAVVEADIEAALEKSETASKEKSRASVVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSEEFAARNDLVLALPERIQAIPDGTPAAPKKTGGWASSASRTEIRFDSDGQFDDEYFQQTEESSKFQQEFEMRKMKQASHIGPGDQGLDMIAEGLDKLKDMAHNMNEELDRQVPLMDEIDAKVDKASSDLKNTNVRLKDTVTQLRSSRNFCIDIVLLIIILGIAAYLYNVLRK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1553 272 PANTHER SYNTAXIN 46 259 IPR045242 -
Acco02g1553 272 FunFam Syntaxin 6 184 247 - -
Acco02g1553 272 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 177 239 IPR000727 -
Acco02g1553 272 Gene3D - 184 248 - -
Acco02g1553 272 CDD SNARE_Qc 184 237 - -
Acco02g1553 272 Pfam SNARE domain 214 263 IPR000727 -
Acco02g1553 272 SUPERFAMILY SNARE fusion complex 183 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1553 Acco-ChrAcco02 11904043 11906599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1553 1 271 SNARE and Associated Proteins AT3G09740 74.359 1.04e-150 420