Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1552 ATGGAGAAAGATCCTAACTTGGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCAGACGAAGAGCTCATTGTTCACTACCTCAGAAACAAAGCAACTTCATGTCCCCTCCCAGCTTCATTCATCGCAGACATAGATCTCTACAAGTTCAACCCATGGGAGCTTCCAAGCAAGGCTTTGTTTGGAGAGGATGAGTGGTTCTTCTTTACTCCGAGGGACAGGAAGTATCCGAATGGGTTGAGGCCAAACAGAGCAGCAGGGTCAGGTTATTGGAAGGCTACGGGGACTGATAAACCAATTCTTAGTTCGTGTGGAATGAAGAGCATTGGAGTGAAGAAAGCCCTCGTGTTCTATAAGGGTCGTCCACCTAAAGGATCTAAAACCGATTGGATCATGCATGAGTATAGGTTGCTCGATTCAATTATCTTGAGTTACAAGCAAAGAGGATCTATGAGACTGGATGATTGGGTGCTGTGCAGGGTTCGACAAAAAATCAGCAGCCCTAGAAGCACTTGGGAGGAGTCGAATGAACCTAGTAATAATGAACCTGCAAGCTACTTTCAACCGATGAATAATTATGAGATTCATCATGATGCTGATGAAACTGTCAAAAACAGTGTGTTCATCAATGAATTTCCCATGTTGCCATATATTCTAGGATCTAAGACGAATAATACTCTTCCTTGTATGGCAAATGCAACATCAAGCTTGAGCTATCAGCGTACCGATAATGCTTTTGTCCATGAAGACACCTCAAACATAGAAGCAGCACAGTTCTCAGAATCTCCTGATGATGAGAGCTTGAAGAGAAAGCTCTGTGAACATAACCAAATGAATCTTTATGATTCTCCTCCCTTTAAGAAGCTAAGAGGGGAAGATCATGAGAGGGACATGCTAGCAATAGACATAAGCAAAACCTACAATAGTGGTTTCAGCAGCTTTAATCATTGGAATGCCATCCTACAGCCTCAAGAGCTTGCCTTCGCAAGATATATTTGA 1002 0.4281 MEKDPNLEIQLPPGFRFHPSDEELIVHYLRNKATSCPLPASFIADIDLYKFNPWELPSKALFGEDEWFFFTPRDRKYPNGLRPNRAAGSGYWKATGTDKPILSSCGMKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLLDSIILSYKQRGSMRLDDWVLCRVRQKISSPRSTWEESNEPSNNEPASYFQPMNNYEIHHDADETVKNSVFINEFPMLPYILGSKTNNTLPCMANATSSLSYQRTDNAFVHEDTSNIEAAQFSESPDDESLKRKLCEHNQMNLYDSPPFKKLRGEDHERDMLAIDISKTYNSGFSSFNHWNAILQPQELAFARYI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1552 333 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Acco02g1552 333 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Acco02g1552 333 FunFam NAC domain-containing protein 72-like 20 170 - -
Acco02g1552 333 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Acco02g1552 333 SUPERFAMILY NAC domain 9 165 IPR036093 GO:0003677|GO:0006355
Acco02g1552 333 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1552 Acco-ChrAcco02 11900726 11901965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1552 10 174 NAC Transcription Factor Family AT1G61110 68.786 2.41e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco02g1552 NAM 1.5e-37 No_clan