Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1537 ATGACAAAAGACCTCGAGGGAACCGCTTCTCACAAGGACTATCGTGACCCCCCTCCCGCTCCTCTCTTCGACGCCGGTGAGCTCAGCAAGTGGTCCTTCTACAGGGCCATCATCGCCGAGTTCGTCGCCACCCTCCTCTTCCTCTACATCACTGTCCTCACCGTTATTGGTTATAAAAGCCAGAGCGACACCGCTCATAACGGAACCGCCTGCGGCGGCGTCGGTATTCTTGGCATTGCCTGGGCCTTTGGCGGCATGATTTTCATCCTCGTCTACTGCACCGCCGGCATTTCTGGAGGACACATAAACCCGGCCGTCACATTCGGGTTGTTCCTGGCGAGGAAGGTGTCGCTGATTAGAGCGATTGCGTACATGGTGGCTCAGTGCCTGGGAGCCATATGTGGGTGTGGCCTGGTCAAGGCTTTCCAAACGGCCTACTACAACAGGTATCAGGGTGGAGCCAACATGTTGTCTTCTGGCTACAGTAAAGGCACTGGTTTGGGTGTTGAGATTATCGGTACCTTGGTCCTTGTCTACACCGTGTTATCTGCCACCGATCCCAAGAGGAATGCCAGAGACTCTCACGTTCCTGTGTTGGCTCCTCTTCCAATTGGATTCGCGGTGTTCATGGTTCACCTGGCCACCATCCCCATCACCGGCACTGGCATAAATCCGGCCCGGAGCTTTGGTGCCGTAGTCATTTACAATCATCAGATGGCATGGGATGACCACTGGATCTTCTGGGTCGGACCCTTCATCGGTGCCGCCATTGCGGCAATTTACCACCAGTATGTGTTGAGAGCTCAGGCAGCCAAAGCTCTGGGCTCTTTCAGGAGCAGCTCCAATTTGTAA 852 0.5493 MTKDLEGTASHKDYRDPPPAPLFDAGELSKWSFYRAIIAEFVATLLFLYITVLTVIGYKSQSDTAHNGTACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIAYMVAQCLGAICGCGLVKAFQTAYYNRYQGGANMLSSGYSKGTGLGVEIIGTLVLVYTVLSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAVVIYNHQMAWDDHWIFWVGPFIGAAIAAIYHQYVLRAQAAKALGSFRSSSNL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1537 283 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Acco02g1537 283 CDD MIP 35 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco02g1537 283 Gene3D Glycerol uptake facilitator protein. 20 283 IPR023271 -
Acco02g1537 283 SUPERFAMILY Aquaporin-like 28 267 IPR023271 -
Acco02g1537 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 277 IPR034294 -
Acco02g1537 283 NCBIfam MIP family channel protein 39 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco02g1537 283 FunFam Probable aquaporin PIP1-2 20 281 - -
Acco02g1537 283 Pfam Major intrinsic protein 27 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco02g1537 283 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco02g1537 283 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco02g1537 283 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco02g1537 283 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco02g1537 283 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco02g1537 283 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1537 Acco-ChrAcco02 11813714 11814913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1537 1 283 Major Intrinsic Protein MIP AT2G37170 81.404 1.16e-173 481