Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1531 ATGAAGCAGAGTTCTGATGCCCTGAGCTTGACGTTAACCTTGAGCCATCTACATGCCTTACCAAGCACGAAACATGATCCAGACGTATGGGCCAGCATAGGCGAAATCCACAGGTTTCATTGGAGCGTCGTGGCCTCTGGTAGATCAAAATCTGTAAGCTGGTTTCAGGATAACCTTGAGAAAGATATAGTGATGGCTAGCATAGAAAGTCCAATGTCCAAGCCAGATTATCAGATGAAGAGAAAAAACCTTTCAAGGGTGTTTTCTGAGGATTATGATGTCTCGAAGAGAAAGATATTCGATCCGAGGGTACCACGTGTAAACAGATGGAACAAAATTTTCTTAGTAGCATGTTTGGTTTCACTATTTGTGGATCCCTTCTTCTTTTACGTGCAAGAGGCTAAGAAAGACAAGTGCATTGCTACATCTACGCGACTCGAAGTTTCCCTTACCACAATTCGGTCCCTGGTTGATGCATTTTACATCATTCATATGTTTTTTCGGTTTCAAACTGCTTATGTTGCTCCTTCCTCTCGTGTTTTTGGTAGAGGAGAGCTAGTTATAGACCCTTCAAAGATTGCATCAAGGTACCTCCAAAAAGACTTCTGGCTTGATCTTCTGGCAGCCCTCCCTCTTCCCCAGGTGTTGATTATAGCTGTAATTCCAAATCTAAGGGGGTCGAAAATGATTGCTTCAAGGGAGACTCTGCGCCTTGTGATCATTTTCCAGTACCTGTTAAGGTTATATCATATCTTCCCTCTTTCATCTGAAATAGTTAAGGCAAATGGAGTAATGATGGAAAAAACATGGGCTGGTGCAGCATATAACCTTATGCTCTATATGCTAGCAAGTCATGTCTTAGGATCCTCCTGGTACCTGTTGGCAATAGAGAGGCAAGATGAATGTTGGAAAAAAGTTTGTGATATTGAGTTCCCAAATTGTCGATACCGTTATCTTGATTGCCAAAGTATAAGTGATCCAGCCAGAGCAGCCTGGTTTAGATCAAGCAACCTGTCAACTTTATGTGATAAGAAAAGTGATTTTTTCCAGTTTGGTATTTTTGCCGATGCTCTCACTTTGGAAATGGAAGACTCAAAGTTCTTAAGCCGATATTATTATTGTCTTTGGTGGGGCCTGCGGAATCTCAGCTCTCTGGGACAGAATCTCCTAACCAGCACTCACGTTGGAGAGATAAATTTTGCTGTGATTATTGCAATTCTTGGGTTGGTGCTTTTTGCACTTCTAATTGGAAACATGCAAACGTACCTGCAATCCACTACTAGGCGACTGGAAGAATGGAGAATAAGACGCACAGATACAGAACGATGGATGCATCACAGACAGTTACCTCATAACTTGAAGCGAAGTGTGAGACGCTATGAGCAATTCAGATGGGTTGCTACGCGAGGAGTTGACGAGGAATCCATCCTTCGAGACCTCCCTGTCGATATCAGACGCGACATCAAACGCCACCTCTGTCTCAACCTCGTCCGACAAGTGCCCCTGTTTGATCAGATGGACGAGAGGGTGCTAGACGCAATATGTGAAAGACTGAAACCTTCTCTGTGTATTCAACGAACACTCCTAGTCCACGAAGGAGATCCTGTGACTGAAATGCGGTTTATAATTCGAGGACGTTTAGATTCTTGTACAACTAATGGTGGCAGAACCGGGTTCTTCAACTGTTGTAAAATCGGACCGGGTGATTTTTGTGGGGAGGAGCTATTGCCATGGGCTCTGGACCCACGTCCAAGTGCTGTTCTTCCTTCATCAACTCGCACAGTGAGAGCCCTAACAGAAGTGGAAGCTTTCGCGCTCGTAGCCGAAGACTTAAAATTTGTGGCAGCTCAGTTCAGGAGACTACACAGCAAGCAACTGAGGCACACGTTCAGGTTTCATTCGCATCAATGGAGGGCATGGGCTGCTTGTTTCATACAAGCTGCTTGGTTTAGATATAAGAGAAGGAAAGAGGCGAGTGAGCTATATCATAATTGTGATGCTGTTGAAACTAAGGTGGAACATTTCTCTGAGCCTTTACACTTGCAACCTCGGGTAGGTTCGAGTGGTACGATGAATAAATTGGCTAAGTTGGGATGTAGCCCCAGGAAAGGTGGAAGCTTGCGATATGGTTCTGAACTTTATATTCTTGGTTCACTCAGGAAGCCCCTTGAACCTGACTTTAGTACCGTTGGAGATTAA 2199 0.4416 MKQSSDALSLTLTLSHLHALPSTKHDPDVWASIGEIHRFHWSVVASGRSKSVSWFQDNLEKDIVMASIESPMSKPDYQMKRKNLSRVFSEDYDVSKRKIFDPRVPRVNRWNKIFLVACLVSLFVDPFFFYVQEAKKDKCIATSTRLEVSLTTIRSLVDAFYIIHMFFRFQTAYVAPSSRVFGRGELVIDPSKIASRYLQKDFWLDLLAALPLPQVLIIAVIPNLRGSKMIASRETLRLVIIFQYLLRLYHIFPLSSEIVKANGVMMEKTWAGAAYNLMLYMLASHVLGSSWYLLAIERQDECWKKVCDIEFPNCRYRYLDCQSISDPARAAWFRSSNLSTLCDKKSDFFQFGIFADALTLEMEDSKFLSRYYYCLWWGLRNLSSLGQNLLTSTHVGEINFAVIIAILGLVLFALLIGNMQTYLQSTTRRLEEWRIRRTDTERWMHHRQLPHNLKRSVRRYEQFRWVATRGVDEESILRDLPVDIRRDIKRHLCLNLVRQVPLFDQMDERVLDAICERLKPSLCIQRTLLVHEGDPVTEMRFIIRGRLDSCTTNGGRTGFFNCCKIGPGDFCGEELLPWALDPRPSAVLPSSTRTVRALTEVEAFALVAEDLKFVAAQFRRLHSKQLRHTFRFHSHQWRAWAACFIQAAWFRYKRRKEASELYHNCDAVETKVEHFSEPLHLQPRVGSSGTMNKLAKLGCSPRKGGSLRYGSELYILGSLRKPLEPDFSTVGD 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1531 732 SUPERFAMILY cAMP-binding domain-like 431 624 IPR018490 -
Acco02g1531 732 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 85 667 - -
Acco02g1531 732 CDD CAP_ED 502 633 IPR000595 -
Acco02g1531 732 SMART cnmp_10 502 633 IPR000595 -
Acco02g1531 732 FunFam Cyclic nucleotide-gated ion channel 1 500 618 - -
Acco02g1531 732 Gene3D Jelly Rolls 500 620 IPR014710 -
Acco02g1531 732 Gene3D Helix hairpin bin 429 493 - -
Acco02g1531 732 Gene3D - 111 426 - -
Acco02g1531 732 SUPERFAMILY Voltage-gated potassium channels 107 424 - -
Acco02g1531 732 FunFam Cyclic nucleotide-gated ion channel 1 429 493 - -
Acco02g1531 732 ProSiteProfiles cAMP/cGMP binding motif profile. 502 587 IPR000595 -
Acco02g1531 732 Pfam Ion transport protein 110 429 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1531 Acco-ChrAcco02 11757281 11761203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1531 72 729 Ion Channels AT2G28260 64.286 0.0 871