Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1525 ATGGAGTCCATCGCCAAGGCCAACGGCGGTCACCATCAGAACAGCGCCTTCTGCCTGAGCAATGGCGCGGCTGATCCCCTGAACTGGGGCGTGGCTGCTGAGTCTCTCATGGGCAGCCACTTGGACGAGGTGAAGCGCATGGTGGCCGAGTATCGGAAGCCGGTGGTCAGGCTTGGAGGAGAGACTCTCACCATCTCTCAGGTGGCTGCCATTGCTGGCCATGACCAGGGCGTGAAGGTGGAGCTGTCGGAGTCGTCGAGGGCCGGCGTTAAGGCCAGCAGCGACTGGGTCATGGATAGCATGAACAAGGGAACTGATAGCTACGGTGTTACCACCGGTTTTGGAGCCACCTCTCACAGGAGAACAAAGCAAGGCGCTGCTTTGCAGAAAGAGCTCATCAGATTTTTGAATGCCGGAATATTCGGCAATGGCACTGAGTCTTGCCAAACTCTGCCGCACTCCGCCACCAGAGCAGCCATGCTAGTGAGAATCAACACTCTCCTCCAGGGGTACTCCGGCATTCGCTTTGAAATCCTCGAAGCCATAACCAAGTTCCTCAACCACAACATCACCCCATGCCTGCCACTTCGCGGTACCATCACAGCATCCGGTGATCTCGTCCCTCTTTCTTACATCGCCGGTTTACTCACCGGCCGACCTAACTCCAAAGCCGTCGGACCCAATGGAGAAGCCCTCAGTCCTAAGGAAGCTTTTCAATTGGCCGGCATCGAGTCTGAGTTCTTCGAATTGCAGCCCAAGGAAGGGCTTGCTCTTGTTAACGGCACCGCCGTTGGTTCTGGCTTGGCCTCCATGGTTCTGTTTGAGGCCAACATTCTTGCCGTGCTCGCTGAAGTTATTTCGGCTATTTTCGCCGAAGTCATGCAAGGGAAGCCGGAATTTACAGACCATTTGACCCATAAATTGAAGCACCACCCTGGGCAAATTGAGGCTGCTGCTATCATGGAGCACATTTTAGATGGAAGCTCCTATGTTAAAGCAGCCAAGAAACTGCACGAGATGGATCCTCTGCAGAAGCCTAGACAAGATCGCTATGCCCTTCGAACTTCACCACAATGGCTCGGTCCTTTAATTGAAGTTATCAGATTCTCCACTAAGTCAATTGAGAGAGAGATCAACTCTGTGAACGATAACCCCTTAATTGATGTTTCAAGGAACAAGGCTCTTCATGGTGGTAACTTCCAGGGTACACCAATTGGAGTCTCTATGGACAACACACGTCTGGCTATTGCTTCCATCGGAAAACTCATGTTTGCTCAATTCTCTGAGCTCGTCAATGACTTCTACAACAATGGTTTGCCTTCCAATCTAACTGCCAGCAGAAACCCCAGCTTGGATTATGGTTTCAAGGGGGCTGAGATTGCCATGGCTTCTTACTGCTCTGAGCTGCAATATCTTGCCAATCCTGTAACAAGCCACGTCCAAAGTGCCGAGCAACACAACCAAGATGTGAACTCTCTGGGTTTGATCTCGTCTAGGAAAACAAACGAAGCCATTGAGATCTTAAAGCTCATGTCCTCCACATTCTTGGTTGCGCTGTGCCAAGCAATTGACTTGAGGCACTTGGAAGAGAACTTGAAGAACACAGTGAAGAACACAGTTAGCCAAGTTGCCAAGAGAACTCTGACCACAGGCGTGAACGGAGAACTCCATCCTTCAAGATTCTGCGAGAAGGATTTAATCAAAGTTGTGGACAGGGAATACGTGTTTGCCTACGCTGATGATCCCTGCAGTGCCCTCTACCCATTGATGCAGAAACTCAGGCAAGTTCTGGTGGACCATGCACTGGCCAATGCCGAGGACGAGAAGAACACGAGCACATCAATCTTCCAAAAGATCGTAACTTTTGAGGAGGAGTTGAAGAATGTGTTGCCCAAGGAAGTTGAGAGTGCTAGAGTTGCCTATGAGACTGGAAATTCTGAAATTCCAAACAAAATCAAGGAATGCAGGTCATATCCTCTGTACAAGTTTGTGAGGGAAGAGCTGGGAACTCAGTTGCTCACCGGCGAGAGGGTGATTTCACCGGGCGAGGAATGTGACAAGGTGTTCACAGCTTTGTGTCAGGGCAAGATCATTGATCCTCTTCTGGAATGTGTTGGCGAGTGGAATGGTGCTCCTCTTCCTATCTGTTAA 2151 0.5049 MESIAKANGGHHQNSAFCLSNGAADPLNWGVAAESLMGSHLDEVKRMVAEYRKPVVRLGGETLTISQVAAIAGHDQGVKVELSESSRAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNGTESCQTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEALSPKEAFQLAGIESEFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLAEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEMDPLQKPRQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLIKVVDREYVFAYADDPCSALYPLMQKLRQVLVDHALANAEDEKNTSTSIFQKIVTFEEELKNVLPKEVESARVAYETGNSEIPNKIKECRSYPLYKFVREELGTQLLTGERVISPGEECDKVFTALCQGKIIDPLLECVGEWNGAPLPIC 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1525 716 FunFam Phenylalanine ammonia-lyase 529 650 - -
Acco02g1525 716 Pfam Aromatic amino acid lyase 63 539 IPR001106 -
Acco02g1525 716 Gene3D - 529 650 IPR023144 -
Acco02g1525 716 Gene3D - 18 262 IPR024083 -
Acco02g1525 716 PANTHER HISTIDINE AMMONIA-LYASE 15 716 IPR001106 -
Acco02g1525 716 NCBIfam phenylalanine ammonia-lyase 25 705 IPR005922 GO:0005737|GO:0006559|GO:0016841
Acco02g1525 716 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841
Acco02g1525 716 CDD PAL-HAL 61 526 IPR001106 -
Acco02g1525 716 FunFam Phenylalanine ammonia-lyase 263 569 - -
Acco02g1525 716 FunFam Phenylalanine ammonia-lyase 17 262 - -
Acco02g1525 716 Gene3D Fumarase/aspartase (Central domain) 263 711 - -
Acco02g1525 716 SUPERFAMILY L-aspartase-like 25 716 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1525 Acco-ChrAcco02 11671650 11674854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1525 23 716 Monolignol Biosynthesis Gene Families AT2G37040 85.447 0.0 1259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1525 02 11671650 11674854 Acco02g1525 02 11671650 11674854 ECH