Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1520 ATGAAGAGAAAGTTTCTGAGAGGGTGCCTTAATAAGTGGAAGAAGATGAAGAGTAGAGTCATACCTTGTTGTGCCTGTGAGTGTTGTAGCAAATGGGCTTCATGGTCGGCCATGCGTGAAAGAAGATCAATCCCAAGTGATGTCCCAAAGGGTCACCTTGTTGTGTATGTGGGAGAGAATTTCAAGAGATTTGTAATCAAAGTCACATTACTGAACCATCCACTCTTCAAGGCATTGCTGGATCAAGCTCGGGAAGAGTACGATTTTGTTTCTTATTCAAAACTTTGCTTCCCCTGCGAGGAGCATCTCTTCCTCAGCGTCCTTCGCTGTGCTAGCTCTCCCAAGAACAATGGAGCGACTCTTTATATATCTTTGCCGCGTGGAGAATTACATTCTTTCGTTTCAAAAAGTATCATCACCAACAAGAATTGGTTGAACCAATTAAATCACTGCATGAATAATATACACATGAAGTATTCTCGTTCAGAATATACACAAGTAGTATATTGGCCTCCTTGTAAAGTACATGAACTACATAGCTGGTGA 546 0.4139 MKRKFLRGCLNKWKKMKSRVIPCCACECCSKWASWSAMRERRSIPSDVPKGHLVVYVGENFKRFVIKVTLLNHPLFKALLDQAREEYDFVSYSKLCFPCEEHLFLSVLRCASSPKNNGATLYISLPRGELHSFVSKSIITNKNWLNQLNHCMNNIHMKYSRSEYTQVVYWPPCKVHELHSW 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1520 181 Pfam Auxin responsive protein 12 110 IPR003676 GO:0009733
Acco02g1520 181 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1520 Acco-ChrAcco02 11651199 11653323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1520 46 113 Calmodulin-binding Proteins AT4G34750 48.611 2.45e-19 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1520 02 11651199 11653323 Acco02g1520 02 11651199 11653323 ECH