Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1517 ATGAACGAGCTTGGACCTCTTTTGCTTCATATTGCCCGTGTTTATAACTTCTCACCTGGATTTTACTCTGTTTGCGTGCTGAGAAACTCAGGAGAAAATGAATATTGTGCAGGCTTTGAGCCTATTCAACCAACCAGTCAAAAGGTTGATGAGGAAGAAACCAACTTCTTGAAACATATCAACGGTTGATGCACAAGAGAGCATGAGATGAACCCAGAAGACTACTTACAGAAGTGCTCCAATATGAAATGCCAAAGGGTTCAGGTAGATGGATCATTTGTTCCTGCTATTCAAGATGAATCCATGGAAGTTGCACATTTGCTTGCAGAGCCTAGAAGTGATCATGTTTCCGTGGATGGCATTTTGTATTTTCATGAGGAGAATGTAGGCAAATGCAGTGATGTAAAAAATCTTTCCTGTGGATTTGAATTTGGTCTAAGTACAAGCATAGGTGGGTCAGGTTCTTACACAACTTTGAATGGAAAAGATGATTTGAAACTTGAGGTATTTGATGGGTTGCTGGAAGATATTGAAAATGGTGGTCTTAATGCGACTGATGAGTTTTCATGTGAAGATTATCTTTTGGATCTTGAATTTGCTGACAAAGCTGTGGGTTTTTGTGGAGAACCTCTATTGCAAAGTTCAAGCTCTGAGAGCCATTCTCCAGGATTAAGTGGAAGTAGCAATTGTGTTGGTGGGGTATCTGAATCATCAAAAGTCGCCATAGAACTATCTGAATATAAAAATGATTTCCTAGATAATAGAGTAACCCATGACTTACATGGTGCCTTCAGGAACGTTTCCTGTCAAACATCAATTGAACATGGAATTTGCCATTCACTTGATGTGAAGCATCTAAATGAGTTGGATAATGATCTCCCTTTAGCAGATAGTGTGTTGTCCTGTAAGAAGGAAAAGGGATCTGCAGATGAATGTGATACTGCCAAAGTTAGAGAGAAGAGATGCCGGAAGCCTACTCTGAGGTATATTGAAGAATTTTCAAGTTTAAGGTCAAAAGAAAAGGTTTTGAGTTCTGCAACCAAAAATAAACCCTCGAGTTTGGCATCCCATCACAAGCTTCGTCATGTAAGGTTGAGGGCATTGAGAAACATTCCAGGCAAGAATTCTGATGGTCAGATGAGTGATGTGGCACTTCCTGAGCTGCAGTTTCACAAGCAATGTCTGAAAAATGAGGAACTTGAGTATGATGAAGATTCTAATGCATCTGAGTCTGAGGATGAATGTGTGACACCAAAAAGATATAGAAAAGATGATCGGAGGAAGCATCAAAGAATGTGGACTTTATCTGAAGTGATCAAGCTGGTTGATGGCATTTCTGAATATGGTGTTGGCCGATGGACTGATATAAAGCGTGTTCTGTTTTCTTCGTTCAGTTACCGTACACCAATAGATCTTAGGGACAAGTGGCGGAATCTTTTAAGAACCAGTTCAGCACAGAAATTTAACAACAAAGAGACTGAACAAAAGCAGCAGCAGCACGCCTTGCGATCTTTACCAAGTACGGTACTTCACCGAGTTCATGAACTGGCTAAAATTCACCCATATCCGAGGGAGCGTTATTCAAAGGAATCATTTTCTGGCCAAGTTGGCTCCTCTGTCCTTCCAACTCGGACAAAAGGTGGTCCCAGCCAAAGAAATGTACGTAGGAAGAAGAGTACTTGA 1683 0.407 MNELGPLLLHIARVYNFSPGFYSVCVLRNSGENEYCAGFEPIQPTSQKVDEEETNFLKHINGXCTREHEMNPEDYLQKCSNMKCQRVQVDGSFVPAIQDESMEVAHLLAEPRSDHVSVDGILYFHEENVGKCSDVKNLSCGFEFGLSTSIGGSGSYTTLNGKDDLKLEVFDGLLEDIENGGLNATDEFSCEDYLLDLEFADKAVGFCGEPLLQSSSSESHSPGLSGSSNCVGGVSESSKVAIELSEYKNDFLDNRVTHDLHGAFRNVSCQTSIEHGICHSLDVKHLNELDNDLPLADSVLSCKKEKGSADECDTAKVREKRCRKPTLRYIEEFSSLRSKEKVLSSATKNKPSSLASHHKLRHVRLRALRNIPGKNSDGQMSDVALPELQFHKQCLKNEELEYDEDSNASESEDECVTPKRYRKDDRRKHQRMWTLSEVIKLVDGISEYGVGRWTDIKRVLFSSFSYRTPIDLRDKWRNLLRTSSAQKFNNKETEQKQQQHALRSLPSTVLHRVHELAKIHPYPRERYSKESFSGQVGSSVLPTRTKGGPSQRNVRRKKST 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1517 560 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 71 544 - -
Acco02g1517 560 SMART sant 429 482 IPR001005 -
Acco02g1517 560 SUPERFAMILY Homeodomain-like 427 514 IPR009057 -
Acco02g1517 560 MobiDBLite consensus disorder prediction 521 560 - -
Acco02g1517 560 Gene3D - 419 531 - -
Acco02g1517 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 425 484 IPR017930 -
Acco02g1517 560 ProSiteProfiles Myb-like domain profile. 425 480 IPR001005 -
Acco02g1517 560 MobiDBLite consensus disorder prediction 531 549 - -
Acco02g1517 560 CDD SANT_TRF 431 481 - -
Acco02g1517 560 Pfam Myb-like DNA-binding domain 433 480 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1517 Acco-ChrAcco02 11633806 11638001 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1517 431 480 Single Myb Histone (SMH) Gene Family AT1G15720 48.000 5.81e-07 50.1