Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1502 ATGTCACAAGATTCTGAGGAGATAAAGACCATTGAGCACTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTTGTCCCACCTGCTCCTATTTCCGGCCCGACGCCGGAAAACGGATACTCCAAAGCAGAGGAAGCGGCCAACGGAGAACCAAGGGACACCATCATGGAAAGCTCTGAGCCCAAGAAAGACGATGGAGAGAAGCCAGACACTGTTCATCCCGTCGGATTCGGCGAGCTTTTCAGATTCGCCGATGGATTAGATTACATTCTAATGGGAATTGGAACGATGGGGGCAATTGTGCACGGGTGTTCTCTGCCTCTGTTTCTTCGGTTTTTCGCTAATCTTGTGAATTCTTTCGGGGCCAATGCCAATGATGTGGACAAGATGACCCGAGAAGTCGTCAAGTACGCATTTTACTTCTTGGTGGTGGGTGCTGCTATATGGGCATCATCGTGGGCAGAGATATCGTGCTGGATGTGGACAGGGGAGAGGCAGTCGACGAAAATGAGGATAAAGTACCTGGAAGCTGCGTTGAACCAGGACATTCAGTATTTTGACACCGAGGTTCGAACTTCCGATGTTGTTTATGCCATTAACACTGATGCTGTCATGGTGCAAGACGCCATTAGCGAGAAGCTGGGTAATTTTATTCACTACATGGCTACATTCGTGTCTGGATTCGTGGTGGGATTCACGGCGGTTTGGCAGTTAGCTTTAGTCACACTCGCCGTAGTCCCAATGATAGCTGTGATCGGAGGCATTCACACAGCCACGTTGGCCAAGCTCTCCGGCAAAAGCCAGCAAGCTCTCTCTCAAGCCGGCAACATAGTGGAACAGACGGTAGCGCAAATTCGAGTGGTAATGGCATTCGTGGGAGAGGGCCGGGCATTGCAAGCCTATACATCGGCATTGAAAGTGGTCCAGAAGATAGGCTACAAAACTGGACTCGCCAAGGGAATGGGATTGGGTGCCACTTACTTTGTCGTTTTTTGCTGTTACGCTCTTCTGTTATGGTACGGTGGTTACCTCGTCAGGCACCACCACACCAATGGCGGACTTGCCATCGCCACCATGTTTGCTGTTATGATAGGTGGACTGGGTTTGGGTCAATCTGCTCCAAGCATGGCTGCATTTACAAAGGCTAGAGTTGCTGCTGCCAAAATTTTCCGTGTAATTGATCACAAGCCAGGGATAGACCGAAACAGTGAATCGGGCTTGGAATTAGAGTCGGTTACAGGATTAGTGGAGCTTAAAAATGTAGACTTCTCATACCCATCAAGGCCAGAGGTTCGAATTCTCAATGATTTCTCACTAGTTGTGCCTGCTGGGAAGACCATAGCCTTGGTTGGTAGTAGTGGCTCTGGCAAGAGCACCGTCGTATCCCTCATTGAGCGATTCTATGACCCCACTTGTGGACAAGTTTTGCTTGATGGGCATGACATTAAAGCATTGAAGCTTAGATGGCTGAGGCAGCAAATAGGACTAGTAAGCCAAGAGCCTGCATTATTTGCTACCACAATTAGAGAAAATATACTGTTGGGTCGGCCAGATGCAGGCCAGGTTGAGATTGAAGAAGCTGCAAGAGTAGCTAATGCTCATTCATTCATTATCAAGCTTCCTGAAGGCTATGATACCCAGGTGGGAGAGAGGGGGCTGCAGCTTTCTGGAGGGCAAAAGCAAAGGATAGCAATTGCAAGGGCAATGTTGAAAAACCCAGCTATTCTTCTGTTGGATGAAGCAACAAGTGCATTAGACTCTGAGTCAGAAAAGCTGGTTCAGGAAGCACTAGACCGATTCATGATTGGTAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACTATTCGCAAAGCCGACCTTGTAGCTGTACTTCAACAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCCTCTCTAAAGGTGAAAATGGAGTGTATGCCAAGCTTATTCGGATGCAGGAAGCAGCACATGAAACTGCTATGAACAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCTAGAAACTCTGTCAGCTCACCAATAATTGCTCGGAATTCTTCTTATGGTCGGTCCCCGTACTCACGGAGGCTGTCAGACTTCTCTACTTCTGACTTTAGTCTGTCCATTGATGCACCATATCCAAATTACAGGCTTGAAAAACTTGCCTTCAAAGACCAAGCTAGTTCCTTCTGGCGACTTGCAAAAATGAACTCTCCTGAATGGCTATATGCTTTTATTGGTTCCATAGGCTCTGTTGTTTGTGGATCTCTTAGTGCCTTCTTTGCTTATGTCCTTAGTGCAGTCCTCAGTGTTTATTACAATCCGGAACACAAAGTTATGATCCGAGAAATTGAGAAGTATTGCTACTTGCTGATTGGCCTTTCATCTGCTGCACTTCTCTTTAATACACTCCAGCATTTCTTCTGGGATATTGTGGGAGAAAATCTTACAAAGCGAGTAAGGGAGAAGATGCTGGCTGCTGTGCTCAAGAACGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTTGCTCTTGATGCCAACAATGTCAGATCCGCCATCGGAGATCGCATTTCAGTGATTGTTCAAAACACGGCCCTTATGCTAGTTGCTTGTACCGCAGGGTTTGTTTTGCAGTGGCGCCTTGCCCTTGTCCTTGTAGCCGTCTTCCCTGTTGTTGTTGCAGCCACGGTTTTACAGAAAATGTTCATGACTGGTTTCTCTGGAGACCTGGAAGAGGCACATGCCAAGTCCACGCAACTAGCAGGAGAAGCCATTGCAAATGTTAGAACCGTTGCTGCCTTCAACTCTGAAACAAAAATTGTTGGTCTTTTCACTTCTAACCTTGAAACTCCACTACGACGATGCTTTTGGAAGGGACAGATTTCTGGAAGTGGGTTTGGGATAGCTCAGTTTGCACTTTATGCTTCCTATGCGCTTGGTTTGTGGTATGCTTCTTGGCTTGTGAAGCACGGAATCTCAGATTTCTCTAAAACAATCAGAGTCTTTATGGTCCTCATGGTTTCTGCCAATGGTGCTGCTGAAACTTTAACCCTGGCACCTGACTTTATCAAGGGAGGTCGAGCTATGAAGTCAGTCTTTGATCTCCTTGACCGAAGAACCGAAATTGAGCCAGATGACTCAGATGCTGTTCCTGTCCCCGACCGTCTTCGTGGCGAAGTTGAACTTAAGCATGTTGACTTCTCATATCCCACTCGCCCTGATATGCCAGTATTTCGTGACCTGAATCTTCGTGCTAGAGCAGGAAAAGCCCTTGCCCTTGTTGGACCTAGTGGCTGTGGTAAGAGCTCAGTCATTGCACTAATACAAAGATTCTATGATCCAACATCTGGGAGAGTGATGATTGATGGAAAGGACATTAGAAAATACAATCTCAAGTCTCTGAGGAGGCACATTGCGGTGGTACCTCAAGAGCCTTGTCTCTTTGCTGCCACTATATACGAAAACATTGCATATGGGCATGAATCAGCCACAGAATCTGAGATAATAGAAGCAGCGACACTTGCCAATGCCCACAAATTCATATCAGCTTTGCCTGATGGATACCAAACATTTGTGGGGGAGAGAGGAGTTCAGCTGTCAGGAGGGCAAAAACAGAGAATAGCGATTGCTCGGGCTTTCCTGAGAAAGGCCGAGGTGATGCTTCTAGATGAAGCAACAAGTGCACTTGATGCTGAGTCTGAGAGGTCTGTTCAGGAGGCTCTGGACCGTGCATGTTCTGGAAAAACAACCATTACTGTTGCTCATAGGCTATCGACTATTAGGAATGCTAGTCTTGTTGCGGTGATCGATGATGGGAAAGTGGCAGAGCAAGGATCTCACTCACATTTGCTGAAAAATCACCCAGATGGGATCTATGCACGAATGATTCAGTTACAAAGGTTTACTCACAGTCAAGTGGTTGAGATGACCTCAGGTTCAAGTTCTTCTGCAAGACCAAAAGATGGTGAAAGAGAAAGCTAG 4011 0.4682 MSQDSEEIKTIEHWKWSEMQGLELVPPAPISGPTPENGYSKAEEAANGEPRDTIMESSEPKKDDGEKPDTVHPVGFGELFRFADGLDYILMGIGTMGAIVHGCSLPLFLRFFANLVNSFGANANDVDKMTREVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTEVRTSDVVYAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTATLAKLSGKSQQALSQAGNIVEQTVAQIRVVMAFVGEGRALQAYTSALKVVQKIGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHHTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRVIDHKPGIDRNSESGLELESVTGLVELKNVDFSYPSRPEVRILNDFSLVVPAGKTIALVGSSGSGKSTVVSLIERFYDPTCGQVLLDGHDIKALKLRWLRQQIGLVSQEPALFATTIRENILLGRPDAGQVEIEEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELLSKGENGVYAKLIRMQEAAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSIDAPYPNYRLEKLAFKDQASSFWRLAKMNSPEWLYAFIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPEHKVMIREIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLAAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEEAHAKSTQLAGEAIANVRTVAAFNSETKIVGLFTSNLETPLRRCFWKGQISGSGFGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMKSVFDLLDRRTEIEPDDSDAVPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLNLRARAGKALALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFAATIYENIAYGHESATESEIIEAATLANAHKFISALPDGYQTFVGERGVQLSGGQKQRIAIARAFLRKAEVMLLDEATSALDAESERSVQEALDRACSGKTTITVAHRLSTIRNASLVAVIDDGKVAEQGSHSHLLKNHPDGIYARMIQLQRFTHSQVVEMTSGSSSSARPKDGERES 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1502 1336 CDD ABC_6TM_Pgp_ABCB1_D1_like 91 388 - -
Acco02g1502 1336 Pfam ABC transporter 433 582 IPR003439 GO:0005524
Acco02g1502 1336 Gene3D - 1059 1310 IPR027417 -
Acco02g1502 1336 Gene3D - 405 655 IPR027417 -
Acco02g1502 1336 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 93 380 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g1502 1336 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 747 1034 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g1502 1336 FunFam ABC transporter B family member 19 1036 1058 - -
Acco02g1502 1336 Gene3D ABC transporter type 1, transmembrane domain 78 667 IPR036640 GO:0005524|GO:0016020
Acco02g1502 1336 ProSitePatterns ABC transporters family signature. 554 568 IPR017871 GO:0005524|GO:0016887
Acco02g1502 1336 MobiDBLite consensus disorder prediction 45 70 - -
Acco02g1502 1336 FunFam ABC transporter B family member 1 726 1035 - -
Acco02g1502 1336 FunFam ABC transporter B family member 1 78 413 - -
Acco02g1502 1336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1061 1309 IPR027417 -
Acco02g1502 1336 CDD ABC_6TM_Pgp_ABCB1_D2_like 736 1052 - -
Acco02g1502 1336 MobiDBLite consensus disorder prediction 1317 1336 - -
Acco02g1502 1336 Pfam ABC transporter 1089 1237 IPR003439 GO:0005524
Acco02g1502 1336 SMART AAA_5 1097 1283 IPR003593 GO:0016887
Acco02g1502 1336 SMART AAA_5 442 628 IPR003593 GO:0016887
Acco02g1502 1336 CDD ABC_MTABC3_MDL1_MDL2 415 654 - -
Acco02g1502 1336 Pfam ABC transporter transmembrane region 92 365 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g1502 1336 Pfam ABC transporter transmembrane region 748 1017 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g1502 1336 FunFam ABC transporter B family member 1 405 655 - -
Acco02g1502 1336 Gene3D ABC transporter type 1, transmembrane domain 727 1035 IPR036640 GO:0005524|GO:0016020
Acco02g1502 1336 Gene3D ABC transporter type 1, transmembrane domain 1036 1318 IPR036640 GO:0005524|GO:0016020
Acco02g1502 1336 FunFam ABC transporter B family member 1 1061 1310 - -
Acco02g1502 1336 SUPERFAMILY ABC transporter transmembrane region 79 399 IPR036640 GO:0005524|GO:0016020
Acco02g1502 1336 ProSitePatterns ABC transporters family signature. 1209 1223 IPR017871 GO:0005524|GO:0016887
Acco02g1502 1336 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1070 1306 IPR003439 GO:0005524
Acco02g1502 1336 SUPERFAMILY ABC transporter transmembrane region 734 1054 IPR036640 GO:0005524|GO:0016020
Acco02g1502 1336 PANTHER ABC TRANSPORTER B FAMILY 55 796 IPR039421 -
Acco02g1502 1336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 406 654 IPR027417 -
Acco02g1502 1336 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 415 651 IPR003439 GO:0005524
Acco02g1502 1336 MobiDBLite consensus disorder prediction 24 70 - -
Acco02g1502 1336 CDD ABC_MTABC3_MDL1_MDL2 1070 1309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1502 Acco-ChrAcco02 11521888 11527573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1502 59 1331 Calmodulin-binding Proteins AT2G36910 88.069 0.0 2297