Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1497 ATGCCGGATCCTTACGATTTCTCCCTCCACGGGTACACCGGAGTTTTAGCGGCACAAATATTAGAAAGCGAAGAGGAATCGGAGGGCAGCGAAGAGGAATCTGAGGGCAGCGAAGAAGAAGAGGAGGATGATGACGAGGAGGACGAGGACGAGGACCAGGCCGAAGAGTACATTCCGCTTGTACAGTCTCCTACGGCATTTCAGGGCGTTCCTTCTACCTCCAGTCAATATGATACAATTCATGAGGTTCCGGATGATTGGGTTGAAGAAGAGGTAAACAAACGGCGGAGGACTGGAGGGGGAGAAACGTGTTCATCTTTGGGAATTGGGAGCACCGACAGTAGTCAAGGGAATGAGTGGAACCGTGCTGACATTGATGGTTTGTATTGCCCCATTTGCCTGGAAGCTTGGACCAATGACGGTGAACACCATATCTGCTGTCTTCCGTGCGGGCACATATATGGCATGTCTTGCATCAAAAGGTGGCTTCAACAGCGGAAAAAATCTGGGAAGTGTCCACAATGCAACAGGAAATGTGCATTGAGGGATGTGAGGAAACTCTATGCTTCACGTGTACTTGCTGCTGATGAAGAGTTACACAAGAAAATTCGGTCGCTTGAGGCTAGATGTGCTATTCTCGAAGGCAAGGGCTCTGACTGGAGCAAGAAAGAAGCAGCGTGGAAGAAAGAAGAAGGTCAATTTCATCTCAAAGTTATGAAACTCACGGAGAGAAATGCATATTTGGAGCAGCTGATACAAGATATGGAAAGAAGGAAAACTAGTACCATGGAGGCAATTGGGTGTCGATGGGGATCTGAATCAAAACATGACTTTGGGGCAAAGATCTATGGGAAAGGACATTGTTGCAATTTTGAATTGCAGAAAGAGTTTCAGCTGGGCAGTGCTCTCGTATTTGACATAAATGCTTCTAATAAAATTTTATTAGTGGCACAAAGGCCAAAAGGGATAGGCGGACCCTACTTGTTGACTAAAATGAGCTTGATGCCTCCATATGAGATGGAAGATATCTTCCTTCCTTCTGGTTCATGTGCTATTAAAGATCTCCATATTTCCCCTTCAAATGGTGACCTAGCCCTTTATGCTTCATTGGGAAGGAAATTATCAGTACTCAGCATGGAGAGCAACAATGTGGTTGTCAATTATGATCTACAGGTTCCTGCTTGGTCATGTACATGGGATCTCAGCAGTTCCCATAATATATATGCTGGACTACAGAATGGTTCTGTCTTGGTATTTGATTTGCGCCAAACTGCTGGGCCCATAAAATCCCTAAACGGGTTAACTACCAACCCCGTTCATACTGTCCAGTCTCTTGTACAAGATTCCAGTCTTCCTTCAGGCGTTGGAACAATTCTATCTGCTTCTGCCATTGGCCTTTGTCAGTGGAACATAGGTGCTGAAGAGGGGCCGTGTATGATTCCTGAAACTGGTAATAATGGGGTTTGTATATCTCTTGCCTATTGCCCAAGTAGTGATGATGTTGTCATATCATACCGTCCCAAATTTGACATGTCCACTGATGGGTCTCTCTCTCAACCATCTCTCACTCCGTCCCAAGTTATAGGACAAGGAGTCCAGGGCTCTCATGTTTTGTTCAAGAGACTTGGCGGAAGCCATTTTCAACCGTTGGGTTCCTCATGTGCCAATGTAAGTAACTTAAGACTTCCAAAATGTGTAATAATGGATATTGAGAGTGAGAGCCGATGGTTAGCATCTGGAGATGAAGGTACATGTGAATTGGTCTTGCAAGAGTTGCCATCTTTTGGGGTTGTTCGGCGTTTGAAATTACCAGAGCATGTGCGGGATCTGAAGTATTCACCTACTCTGAATCATGGATTACTGGGATGTTTAACTGGAAAGTCATTGCAACTTTTCTGTAACAAACTCTCTTGA 1914 0.4504 MPDPYDFSLHGYTGVLAAQILESEEESEGSEEESEGSEEEEEDDDEEDEDEDQAEEYIPLVQSPTAFQGVPSTSSQYDTIHEVPDDWVEEEVNKRRRTGGGETCSSLGIGSTDSSQGNEWNRADIDGLYCPICLEAWTNDGEHHICCLPCGHIYGMSCIKRWLQQRKKSGKCPQCNRKCALRDVRKLYASRVLAADEELHKKIRSLEARCAILEGKGSDWSKKEAAWKKEEGQFHLKVMKLTERNAYLEQLIQDMERRKTSTMEAIGCRWGSESKHDFGAKIYGKGHCCNFELQKEFQLGSALVFDINASNKILLVAQRPKGIGGPYLLTKMSLMPPYEMEDIFLPSGSCAIKDLHISPSNGDLALYASLGRKLSVLSMESNNVVVNYDLQVPAWSCTWDLSSSHNIYAGLQNGSVLVFDLRQTAGPIKSLNGLTTNPVHTVQSLVQDSSLPSGVGTILSASAIGLCQWNIGAEEGPCMIPETGNNGVCISLAYCPSSDDVVISYRPKFDMSTDGSLSQPSLTPSQVIGQGVQGSHVLFKRLGGSHFQPLGSSCANVSNLRLPKCVIMDIESESRWLASGDEGTCELVLQELPSFGVVRRLKLPEHVRDLKYSPTLNHGLLGCLTGKSLQLFCNKLS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1497 637 Gene3D - 337 518 IPR015943 GO:0005515
Acco02g1497 637 Coils Coil 238 258 - -
Acco02g1497 637 ProSiteProfiles Zinc finger RING-type profile. 130 176 IPR001841 -
Acco02g1497 637 SUPERFAMILY WD40 repeat-like 347 621 IPR036322 GO:0005515
Acco02g1497 637 MobiDBLite consensus disorder prediction 24 56 - -
Acco02g1497 637 Coils Coil 20 40 - -
Acco02g1497 637 SMART ring_2 130 175 IPR001841 -
Acco02g1497 637 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 245 IPR013083 -
Acco02g1497 637 SUPERFAMILY RING/U-box 122 180 - -
Acco02g1497 637 MobiDBLite consensus disorder prediction 21 77 - -
Acco02g1497 637 MobiDBLite consensus disorder prediction 95 118 - -
Acco02g1497 637 Pfam Ring finger domain 129 176 IPR001841 -
Acco02g1497 637 PANTHER RFWD3 PROTEIN 24 635 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Acco02g1497 637 MobiDBLite consensus disorder prediction 104 118 - -
Acco02g1497 637 CDD mRING-C3HGC3_RFWD3 126 188 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1497 129 181 C3H Transcription Factor Family AT1G51930 42.593 4.24e-07 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1497 02 11472791 11477048 Acco02g1497 02 11472791 11477048 ECH