Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1485 ATGGGAATCCAAAATCAGGATGGTCTATGGGCCCAGTTTAAGGGTAACGCGTATGAAAGATTATGCAGTGAGCCAGAAGACCGCCTGGAGGCTGGCAAATGGGGAGTAAAAGAGGAGATGAATGGAAACGAAAGAGGAGGAGATGTTGAGAAGGCACACGTGTCAAACTATGATGGGCAGTCATATTCATTGCATTTATCAGTTGATTGCATTTATAAGGGGATGGAGCTGTCGCTGTTAGGTTTCATCGTCACCCTTCAGATTCAACGGACATCGAGACCAGAAGCTGGAACGATGGACTGCATCGTGAAGCCGCAGATGTTGACCCAGGGAGTTTCTCAGCCAGATGACGGCTCTCTTTACGAGACAGGATCTGGCCATTACGGGTGTTCACACTATAGAAGGAGATGCAAAATAATAGCGCCATGTTGCAATGAAATATTCGATTGCAGACATTGCCATAATGAATCTAAGAACTCGATTGAACTGGACCCTGTTGATCGCCATGACGTTCCTCGTCACGATTTAAAGAGAGTTATCTGTTCCTTGTGTAGCACCGAGCAAGATGTTCAACAAATATGCATTCAGTGCGGTGTTTACATGGGGAATTACTTCTGCTCCAAGTGCAAGTTTTTTGATGATGATGTATCAAAGAATCAGTACCATTGCAATGAATGTGGTATCTGCAGAATTGGAGGCGAGGAGAATTTTTTCCATTGCCACAAATGTGGATGTTGCTATTCAATATTGTTGAAGAACTCACACCGATGTGTTGAAAAAGCTATGCATCACAATTGTCCTGTTTGCTTTGAGTTTCTTTTTGATACCACAAAAGACATTACTGTATTGCCATGTAGTCACTGCATCCATCTGGCATGTGTGAGAGAAATGGAACAGCACCTCCAGTATTCTTGCCCTGTTTGTTCAAAATCATTTTGTGATATGTCGCGTGTTTGGGAGAGACTAGATCTTGAGGTTGCATTAACACCTATGCCAGAAATATATCAAAATAAGATGGTCTGGATTCTATGCAATGATTGTGGAGAAACATCAGAGGTGAACTTTAACATTTTGGCGCATAAGTGTACAAAATGCAAATCCTACAACACTAGACAGACGCAAGGCGGACTTACATCATGCTCGTCCAACACTGAAGAGGTGCTGTAG 1167 0.4293 MGIQNQDGLWAQFKGNAYERLCSEPEDRLEAGKWGVKEEMNGNERGGDVEKAHVSNYDGQSYSLHLSVDCIYKGMELSLLGFIVTLQIQRTSRPEAGTMDCIVKPQMLTQGVSQPDDGSLYETGSGHYGCSHYRRRCKIIAPCCNEIFDCRHCHNESKNSIELDPVDRHDVPRHDLKRVICSLCSTEQDVQQICIQCGVYMGNYFCSKCKFFDDDVSKNQYHCNECGICRIGGEENFFHCHKCGCCYSILLKNSHRCVEKAMHHNCPVCFEFLFDTTKDITVLPCSHCIHLACVREMEQHLQYSCPVCSKSFCDMSRVWERLDLEVALTPMPEIYQNKMVWILCNDCGETSEVNFNILAHKCTKCKSYNTRQTQGGLTSCSSNTEEVL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1485 388 ProSiteProfiles Zinc finger RING-type profile. 266 309 IPR001841 -
Acco02g1485 388 SUPERFAMILY Zinc hairpin stack 202 259 IPR037275 -
Acco02g1485 388 SUPERFAMILY RING/U-box 265 315 - -
Acco02g1485 388 Gene3D - 337 386 - -
Acco02g1485 388 SMART ring_2 266 308 IPR001841 -
Acco02g1485 388 Pfam CHY zinc finger 130 211 IPR008913 GO:0008270
Acco02g1485 388 SUPERFAMILY CHY zinc finger-like 125 200 IPR037274 GO:0008270
Acco02g1485 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 259 311 IPR013083 -
Acco02g1485 388 ProSiteProfiles Zinc finger CTCHY-type profile. 201 265 IPR017921 -
Acco02g1485 388 ProSiteProfiles Zinc finger CHY-type profile. 123 199 IPR008913 GO:0008270
Acco02g1485 388 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 119 374 - -
Acco02g1485 388 Pfam Zinc-ribbon 313 371 IPR039512 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1485 Acco-ChrAcco02 11366087 11372454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1485 128 371 C2H2 Transcription Factor Family AT3G18290 41.200 5.28e-53 187